RNA–Protein interactions for RNA: ENST00000372833.5

CHCHD1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD1, Length 835 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-201ENST00000372833 STAG3L1P0CL83 205 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 AP3B2Q13367 1082 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 FAM160B1Q5W0V3 765 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 TEX2Q8IWB9 1127 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 BARHL2Q9NY43 387 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 LRFN2Q9ULH4 789 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 PCDHA2Q9Y5H9 948 aa20.17■□□□□ 0.82
CHCHD1-201ENST00000372833 PI4K2BG5E9Z4 385 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 DGKIO75912 1065 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 SREBF1P36956 1147 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 SLC26A2P50443 739 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 KRT76Q01546 638 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 EXOSC10Q01780 885 aaKnown RBP20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 ITGB3BPQ13352 177 aaPredicted RBP20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 PAN2Q504Q3 1202 aaKnown RBP20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 NPAS4Q8IUM7 802 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 CKAP2LQ8IYA6 745 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 IGFLR1Q9H665 355 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 PADI3Q9ULW8 664 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 SQORQ9Y6N5 450 aa20.16■□□□□ 0.82
CHCHD1-201ENST00000372833 SMIM35A0A1B0GVV1 85 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 GPR37L1O60883 481 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 HMGB1P09429 215 aaKnown RBP20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 SCG2P13521 617 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 NFX1Q12986 1120 aaKnown RBP20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 CLUL1Q15846 466 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 ADCK5Q3MIX3 580 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 MTHFD1LQ6UB35 978 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 SKAP1Q86WV1 359 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 PLA2G4DQ86XP0 818 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 NME8Q8N427 588 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 CLP1Q92989 425 aaKnown RBP20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 PPP2R3CQ969Q6 453 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 ZNF689Q96CS4 500 aaPredicted RBP20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 UIMC1Q96RL1 719 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 PLVAPQ9BX97 442 aa20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 RC3H2Q9HBD1 1191 aaKnown RBP20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 ALG13Q9NP73 1137 aaKnown RBP20.15■□□□□ 0.82
CHCHD1-201ENST00000372833 IGSF9BQ9UPX0 1349 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 MEIS1O00470 390 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 CDC45O75419 566 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 ALADP13716 330 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 KLRC1P26715 233 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 METAP2P50579 478 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 CSPP1Q1MSJ5 1256 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 TMEM266Q2M3C6 531 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 MIS18BP1Q6P0N0 1132 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 PDXDC2PQ6P474 469 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 CENPQQ7L2Z9 268 aaPredicted RBP20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 CMTR2Q8IYT2 770 aaKnown RBP20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 LINC01599Q8WXQ3 324 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 ZNF302Q9NR11 478 aa20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 MRPL42Q9Y6G3 142 aaKnown RBP20.14■□□□□ 0.81
CHCHD1-201ENST00000372833 HBP1O60381 514 aa20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 CDC27P30260 824 aa20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 FUT2Q10981 343 aa20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 HYAL1Q12794 435 aa20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 SPOUT1Q5T280 376 aaKnown RBP20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 TRMT1LQ7Z2T5 733 aaKnown RBP20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 RASEFQ8IZ41 740 aa20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 ATP8B4Q8TF62 1192 aa20.13■□□□□ 0.81
CHCHD1-201ENST00000372833 DENND3A2RUS2 1198 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 CCNE2O96020 404 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 MMP1P03956 469 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 LINC00271P0C7V0 271 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 CLK2P49760 499 aaKnown RBP20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 AKAP17AQ02040 695 aaKnown RBP20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 ODR4Q5SWX8 454 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 SWSAP1Q6NVH7 229 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 NIPA1Q7RTP0 329 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 RTN4RL1Q86UN2 441 aaPredicted RBP20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 CCDC12Q8WUD4 166 aaPredicted RBP20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 C6orf50Q9HD87 102 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 C11orf16Q9NQ32 467 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 PLAGL2Q9UPG8 496 aa20.12■□□□□ 0.81
CHCHD1-201ENST00000372833 TTC3P53804 2025 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 FAM86B1E9PN63 330 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 IPO5O00410 1097 aaKnown RBP20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 RPS6KA5O75582 802 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 ATG7O95352 703 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 FAM86B2P0C5J1 330 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 ADD1P35611 737 aaKnown RBP20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 NDUFV1P49821 464 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 RCAN1P53805 252 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 APOBRQ0VD83 1088 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 PFKFB3Q16875 520 aaPredicted RBP20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 TSGA10IPQ3SY00 556 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 ABHD15Q6UXT9 468 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 CCDC60Q8IWA6 550 aaPredicted RBP20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 REXO1Q8N1G1 1221 aaKnown RBP20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 P2RX5Q93086 422 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 PPP1R16BQ96T49 567 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 PRKAG3Q9UGI9 489 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 PCDHB7Q9Y5E2 793 aa20.11■□□□□ 0.81
CHCHD1-201ENST00000372833 COL1A2P08123 1366 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms