RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 ACTRT1Q8TDG2 376 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 CUL5Q93034 780 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 RAB34Q9BZG1 259 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 AZI2Q9H6S1 392 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 NAGPAQ9UK23 515 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 NTSR2O95665 410 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 KRT13P13646 458 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 UBE2SQ16763 222 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 TPCN2Q8NHX9 752 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 SYN2Q92777 582 aaPredicted RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 OSGEPQ9NPF4 335 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 SAMD15Q9P1V8 674 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 STK38LQ9Y2H1 464 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 SNX24Q9Y343 169 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 ABCB11O95342 1321 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
SNX21-205ENST00000372547 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 MGRN1O60291 552 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 TAF1P21675 1872 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 NR2F2P24468 414 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 LRRC14Q15048 493 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 COBLL1Q53SF7 1204 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 TRIM59Q8IWR1 403 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 KDM4CQ9H3R0 1056 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 ATP6V0A4Q9HBG4 840 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNX21-205ENST00000372547 HDAC9Q9UKV0 1011 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 COL4A1P02462 1669 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 ARAP2Q8WZ64 1704 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 SRRM3A6NNA2 597 aaPredicted RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 UBAP2Q5T6F2 1119 aaKnown RBP13.04□□□□□ -0.32
SNX21-205ENST00000372547 ERMARDQ5T6L9 678 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 PROM2Q8N271 834 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 DYDC1Q8WWB3 177 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 FAM129AQ9BZQ8 928 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 ABCF3Q9NUQ8 709 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 PAPPAQ13219 1627 aa13.04□□□□□ -0.32
SNX21-205ENST00000372547 RGS16O15492 202 aaPredicted RBP13.03□□□□□ -0.32
SNX21-205ENST00000372547 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 ANP32DO95626 131 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 UCHL3P15374 230 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CRYMQ14894 314 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 IRF2BP2Q7Z5L9 587 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 LRRC57Q8N9N7 239 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 C3orf20Q8ND61 904 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX21-205ENST00000372547 PRCCQ92733 491 aaPredicted RBP13.03□□□□□ -0.32
SNX21-205ENST00000372547 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 GANQ9H2C0 597 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CCDC189A1A4V9 331 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CCDC188H7C350 402 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 DNAJC8O75937 253 aaPredicted RBP13.03□□□□□ -0.32
SNX21-205ENST00000372547 GFPT2O94808 682 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 H2AFZP0C0S5 128 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 DENND2CQ68D51 928 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 H2AFVQ71UI9 128 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 OTUD6AQ7L8S5 288 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 GPBP1Q86WP2 473 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CCDC25Q86WR0 208 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
SNX21-205ENST00000372547 DNAJC19Q96DA6 116 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 MTMR9Q96QG7 549 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CETN3O15182 167 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 FLOT1O75955 427 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 CLSTN1O94985 981 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 KCNJ2P63252 427 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 PSMD2Q13200 908 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 SLC29A2Q14542 456 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 LLGL1Q15334 1064 aa13.03□□□□□ -0.32
SNX21-205ENST00000372547 EXOC3L4Q17RC7 722 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms