RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 POTEB3A0JP26 581 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 ARHGEF37A1IGU5 675 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 NR2F2P24468 414 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 EXOC3L4Q17RC7 722 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 POTEBQ6S5H4 581 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 CCDC197Q8NCU1 140 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 Q9H521 79 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 RIC8AQ9NPQ8 531 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 PPP2R5DQ14738 602 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 NSUN6Q8TEA1 469 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 TCP11Q8WWU5 503 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 RUNDC3BQ96NL0 473 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 NRXN1Q9ULB1 1477 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 COPB2P35606 906 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 ADCY8P40145 1251 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 BPIFB4P59827 614 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 CUL4AQ13619 759 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 H0YC42 278 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 CASP14P31944 242 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 CTTNQ14247 550 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 PDZD4Q76G19 769 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 RFX7Q2KHR2 1363 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 PLA2G4BP0C869 781 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 FCER1AP12319 257 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 PTK2Q05397 1052 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 BBOF1Q8ND07 529 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 DHTKD1Q96HY7 919 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 PARVGQ9HBI0 331 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 SUN1O94901 812 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 SRGAP2CP0DJJ0 459 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 DPEP1P16444 411 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 ANGPT1Q15389 498 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 UBE2Q1Q7Z7E8 422 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 PPP4R1Q8TF05 950 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 FAM167AQ96KS9 214 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 CNOT6LQ96LI5 555 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 SLC24A3Q9HC58 644 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 KRT75O95678 551 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 MYL1P05976 194 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 ELP3Q9H9T3 547 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 TSC22D4Q9Y3Q8 395 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 UBN2Q6ZU65 1347 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 THAP12O43422 761 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 OPHN1O60890 802 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 FAM186BQ8IYM0 893 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 FAM49AQ9H0Q0 323 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 PCIF1Q9H4Z3 704 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 CPS1P31327 1500 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 C11orf57Q6ZUT1 292 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 DRC3Q9H069 523 aa14.37□□□□□ -0.11
RAPGEF1-201ENST00000372189 CCDC151A5D8V7 595 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 GIPC1O14908 333 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 NMT2O60551 498 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 LRRC41Q15345 812 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 CASC4Q6P4E1 433 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 RSBN1LQ6PCB5 846 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 RSAD2Q8WXG1 361 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 TTLL4Q14679 1199 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 FDX1P10109 184 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 NSFP46459 744 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 IFT88Q13099 833 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 CYB5R4Q7L1T6 521 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 EFHD2Q96C19 240 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 SAAL1Q96ER3 474 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 DTNBP1Q96EV8 351 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 H2AFZP0C0S5 128 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 GRM4Q14833 912 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 ALX1Q15699 326 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 H2AFVQ71UI9 128 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 F5H6K3 240 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 KLRC3Q07444 240 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 ALCAMQ13740 583 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 SPATA17Q96L03 361 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms