RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SLITRK3O94933 977 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 NR3C1P04150 777 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 FAM228BP0C875 321 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 EHHADHQ08426 723 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 ORC2Q13416 577 aaPredicted RBP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 PDXDC1Q6P996 788 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 BAP1Q92560 729 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 VCPKMTQ9H867 229 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 CEP55Q53EZ4 464 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 FAM178BQ8IXR5 827 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 SYT2Q8N9I0 419 aaPredicted RBP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 ZKSCAN4Q969J2 545 aaPredicted RBP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 KCTD10Q9H3F6 313 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 UNC45AQ9H3U1 944 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 VPS18Q9P253 973 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 HERC5Q9UII4 1024 aaKnown RBP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 LRRN2O75325 713 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 NOL4O94818 638 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 HOXD13P35453 343 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 CAP2P40123 477 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 SPP2Q13103 211 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 OTOP1Q7RTM1 612 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 RIN2Q8WYP3 895 aaPredicted RBP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 FAM84AQ96KN4 292 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 LXNQ9BS40 222 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
PDE6C-201ENST00000371447 VAV3Q9UKW4 847 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 PCDHA2Q9Y5H9 948 aa12.91□□□□□ -0.34
PDE6C-201ENST00000371447 AMPD2Q01433 879 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 MTMR2Q13614 643 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 ASIC2Q16515 512 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 EXOC3L4Q17RC7 722 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 ZCWPW2Q504Y3 356 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 FAM20AQ96MK3 541 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
PDE6C-201ENST00000371447 FUT8Q9BYC5 575 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 GPRC5CQ9NQ84 441 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 GOLGA8IPA6NC78 632 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 GFPT2O94808 682 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 FECHP22830 423 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 SOX10P56693 466 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 DMTNQ08495 405 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 TRAPPC11Q7Z392 1133 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
PDE6C-201ENST00000371447 ESYT3A0FGR9 886 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 KIF20AO95235 890 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 ABCB4P21439 1286 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 KLRC1P26715 233 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 LLGL1Q15334 1064 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 TERF2Q15554 542 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 TRIM59Q8IWR1 403 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 WNK4Q96J92 1243 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 RABEP2Q9H5N1 569 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 MYOZ2Q9NPC6 264 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 GCNT4Q9P109 453 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 USP20Q9Y2K6 914 aa12.9□□□□□ -0.35
PDE6C-201ENST00000371447 MRPL11Q9Y3B7 192 aaKnown RBP12.9□□□□□ -0.35
PDE6C-201ENST00000371447 MYH4Q9Y623 1939 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 CENPFP49454 3210 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 H3BQF6 201 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 ERLIN1O75477 346 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 PALMO75781 387 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
PDE6C-201ENST00000371447 ITGB5P18084 799 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 MIER3Q7Z3K6 550 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 ALS2CR12Q96Q35 445 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 EXOC3O60645 756 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 VIL1P09327 827 aaKnown RBP12.89□□□□□ -0.35
PDE6C-201ENST00000371447 NPEPPSP55786 919 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 PTK2Q05397 1052 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 ADAT2Q7Z6V5 191 aaKnown RBP12.89□□□□□ -0.35
PDE6C-201ENST00000371447 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
PDE6C-201ENST00000371447 CNTNAP1P78357 1384 aa12.89□□□□□ -0.35
PDE6C-201ENST00000371447 CYP3A7-CYP3A51PA0A087WV96 503 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 ZBTB22O15209 634 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 CYP3A7P24462 503 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 LMAN1P49257 510 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 Q4G0T1 1027 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
PDE6C-201ENST00000371447 PLA2G4FQ68DD2 849 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDE6C-201ENST00000371447 EHBP1Q8NDI1 1231 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 MRIQ9BWK5 157 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 KCNH7Q9NS40 1196 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 K7ENM7 598 aa12.88□□□□□ -0.35
PDE6C-201ENST00000371447 CALUO43852 315 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms