RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 MDM1Q8TC05 714 aa17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 DDX23Q9BUQ8 820 aaKnown RBP17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 LRWD1Q9UFC0 647 aa17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 FBXL5Q9UKA1 691 aa17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 COL15A1P39059 1388 aa17.31■□□□□ 0.36
PHACTR3-204ENST00000371015 AGTP01019 485 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 CCDC174Q6PII3 467 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 GRAMD1AQ96CP6 724 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 SNX27Q96L92 541 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 DDX43Q9NXZ2 648 aaKnown RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 TFR2Q9UP52 801 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 PCDHA13Q9Y5I0 950 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 ZSCAN5CA6NGD5 496 aaPredicted RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 ECHS1P30084 290 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 HNRNPH3P31942 346 aaKnown RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 CDK7P50613 346 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 ACVR2BQ13705 512 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 INAQ16352 499 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 ZNF772Q68DY9 489 aaPredicted RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 STAG2Q8N3U4 1231 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 IP6K1Q92551 441 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 PTTG2Q9NZH5 202 aa17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
PHACTR3-204ENST00000371015 RGS2P41220 211 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 PAK1Q13153 545 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 TRIM29Q14134 588 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 KRT72Q14CN4 511 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 SCUBE1Q8IWY4 988 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 ZNF507Q8TCN5 953 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 DQX1Q8TE96 717 aaKnown RBP17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 KLHL14Q9P2G3 628 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 ANXA1P04083 346 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 NUDT17P0C025 328 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 PSMC1P62191 440 aaKnown RBP17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 R3HDM1Q15032 1099 aaKnown RBP17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 CCDC6Q16204 474 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 SPDYAQ5MJ70 313 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 KRT40Q6A162 431 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 RSPH3Q86UC2 560 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 EFR3BQ9Y2G0 817 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
PHACTR3-204ENST00000371015 WDR19Q8NEZ3 1342 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 RAD51CO43502 376 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 TBC1D12O60347 775 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 HNRNPCL1O60812 293 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 MOCS3O95396 460 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 CXCR5P32302 372 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 TMEM53Q6P2H8 277 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 MARK2Q7KZI7 788 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 NANOGNBQ7Z5D8 188 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 TMC3Q7Z5M5 1100 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 FAM13CQ8NE31 585 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 DEPTORQ8TB45 409 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 NAT14Q8WUY8 206 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 UTP4Q969X6 686 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 TTYH3Q9C0H2 523 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 BTBD7Q9P203 1132 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 PRKAG3Q9UGI9 489 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 PNMA2Q9UL42 364 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 PDS5AQ29RF7 1337 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 DCDC2CA8MYV0 355 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 EYA4O95677 639 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 VDRP11473 427 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 ZNF280DQ6N043 979 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 TAOK1Q7L7X3 1001 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 ZC3H18Q86VM9 953 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 ST13P4Q8IZP2 240 aaPredicted RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 PDCD7Q8N8D1 485 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 AIPL1Q9NZN9 384 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 PASKQ96RG2 1323 aa17.28■□□□□ 0.36
PHACTR3-204ENST00000371015 KCNQ3O43525 872 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 VAV1P15498 845 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 VARSP26640 1264 aaKnown RBP17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 DPYDQ12882 1025 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 CCDC153Q494R4 210 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 PDCD4Q53EL6 469 aaKnown RBP17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 C6orf118Q5T5N4 469 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 SPATA24Q86W54 205 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 STK11IPQ8N1F8 1099 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 FITM2Q8N6M3 262 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 CGREF1Q99674 301 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 SELENOSQ9BQE4 189 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
PHACTR3-204ENST00000371015 AFPP02771 609 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms