RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 ZC3H18Q86VM9 953 aaKnown RBP18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 ZNF710Q8N1W2 664 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 SDCCAG3Q96C92 435 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 SAYSD1Q9NPB0 183 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 SMYD2Q9NRG4 433 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 USP42Q9H9J4 1324 aaKnown RBP18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 A0A0G2JND7 137 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 PNMA6FA0A0J9YX94 578 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 ERVV-1B6SEH8 477 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 TRPA1O75762 1119 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 ALX1Q15699 326 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 CALN1Q9BXU9 219 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 HAUS2Q9NVX0 235 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 FBXO2Q9UK22 296 aaPredicted RBP18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 PNMA2Q9UL42 364 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 CFAP73A6NFT4 308 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 FMR1Q06787 632 aaKnown RBP eCLIP18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 RAPH1Q70E73 1250 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 CHP1Q99653 195 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 SLITRK6Q9H5Y7 841 aa18.44■□□□□ 0.54
PTP4A1-201ENST00000370651 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 DARS2Q6PI48 645 aaKnown RBP18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 PSD3Q9NYI0 1048 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 FBXL5Q9UKA1 691 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 SATB1Q01826 763 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 ATG16L1Q676U5 607 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 RNF207Q6ZRF8 634 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 CYTH2Q99418 400 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 CENPKQ9BS16 269 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 YIPF3Q9GZM5 350 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 TMEM60Q9H2L4 133 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 GINM1Q9NU53 330 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 TUBE1Q9UJT0 475 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 PACSIN2Q9UNF0 486 aaPredicted RBP18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 MAP3K4Q9Y6R4 1608 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 NR1H3Q13133 447 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 TC2NQ8N9U0 490 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 ADPGKQ9BRR6 497 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 EFHD1Q9BUP0 239 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 ANO3Q9BYT9 981 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 ACTN1P12814 892 aa18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 GUF1Q8N442 669 aaKnown RBP18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 ZNF277Q9NRM2 450 aaPredicted RBP18.43■□□□□ 0.54
PTP4A1-201ENST00000370651 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 ATP2C1P98194 919 aaPredicted RBP18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 RAD54LQ92698 747 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 NRBP2Q9NSY0 501 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 SEPT9Q9UHD8 586 aaPredicted RBP18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 IVNS1ABPQ9Y6Y0 642 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 EIF3HO15372 352 aaKnown RBP eCLIP18.42■□□□□ 0.541e-5■□□□□ 9.1
PTP4A1-201ENST00000370651 GRAMD1BQ3KR37 738 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 EPM2AIP1Q7L775 607 aaPredicted RBP18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 MLXIPLQ9NP71 852 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 BRAFP15056 766 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 CDK8P49336 464 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 DRP2Q13474 957 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 SLAIN2Q9P270 581 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 PPIP5K2O43314 1243 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 NR3C1P04150 777 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 GPC5P78333 572 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 EDEM3Q9BZQ6 932 aa18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 NOC2LQ9Y3T9 749 aaKnown RBP18.42■□□□□ 0.54
PTP4A1-201ENST00000370651 TCP10L2B9ZVM9 353 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 MDH1P40925 334 aaKnown RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 COASYQ13057 564 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ALCAMQ13740 583 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 CCNI2Q6ZMN8 369 aaPredicted RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 LRRC43Q8N309 656 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 HDAC11Q96DB2 347 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 LRRC37BQ96QE4 947 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 EPN3Q9H201 632 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ETNK1Q9HBU6 452 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 FAM187AA6NFU0 413 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ZNF185O15231 689 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 BMP3P12645 472 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 FXR1P51114 621 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 CAV1Q03135 178 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ZNF211Q13398 564 aaPredicted RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 NR1I3Q14994 352 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 KRT80Q6KB66 452 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 RAD9BQ6WBX8 426 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ABTB1Q969K4 478 aaPredicted RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ANAPC7Q9UJX3 599 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 CHRNA3P32297 505 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 STX1BP61266 288 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 ERFEQ4G0M1 354 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 PIP4K2CQ8TBX8 421 aa18.41■□□□□ 0.54
PTP4A1-201ENST00000370651 KCNV2Q8TDN2 545 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms