RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ORAI3Q9BRQ5 295 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 DEFB129Q9H1M3 183 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 RBM28Q9NW13 759 aaKnown RBP4.42□□□□□ -1.7
MCF2-203ENST00000370576 SLC5A4Q9NY91 659 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 EP400Q96L91 3159 aa4.42□□□□□ -1.7
MCF2-203ENST00000370576 A0A1B0GUL7 405 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 NUTM2BA6NNL0 878 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 NUTM2EB1AL46 878 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 M0QX08 132 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 KIF2AO00139 706 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 NEMFO60524 1076 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 SOCS5O75159 536 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 MYCLP1P12525 358 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 ATP6V1AP38606 617 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 NRLP54845 237 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 GTF2H3Q13889 308 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 MEA1Q16626 185 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 FAM98CQ17RN3 349 aaKnown RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 EML3Q32P44 896 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 WDR44Q5JSH3 913 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 NUTM2AQ8IVF1 878 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 OR10H5Q8NGA6 315 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 ZNF274Q96GC6 653 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 XAGE2Q96GT9 111 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 TRIM55Q9BYV6 548 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 PUS3Q9BZE2 481 aaKnown RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 UNC45AQ9H3U1 944 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 INCENPQ9NQS7 918 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 PDCD11Q14690 1871 aaKnown RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 M0R2C6 588 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 KIF5CO60282 957 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 PFKFB2O60825 505 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 EIF2B5Q13144 721 aaKnown RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 SP140Q13342 867 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 MOGSQ13724 837 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 SCARF1Q14162 830 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 SEC23AQ15436 765 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 CTC1Q2NKJ3 1217 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 TTC31Q49AM3 519 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 MCMDC2Q4G0Z9 681 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 FBXL19Q6PCT2 694 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 ZNF589Q86UQ0 364 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 ZNF354CQ86Y25 554 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 KDF1Q8NAX2 398 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 ZMIZ2Q8NF64 920 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 DBNDD2Q9BQY9 259 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 ANKRD2Q9GZV1 360 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 PUS7LQ9H0K6 701 aaKnown RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 GGA3Q9NZ52 723 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 LAMP5Q9UJQ1 280 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 HPS5Q9UPZ3 1129 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 MAPK8IP1Q9UQF2 711 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 DAGLAQ9Y4D2 1042 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 EPN1Q9Y6I3 576 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 MGAMO43451 1857 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 RCCD1A6NED2 376 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 FBXO21O94952 628 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 EOMESO95936 686 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 FAM153BP0C7A2 387 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 FDX1P10109 184 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 CAPN2P17655 700 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 MAGEA8P43361 318 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 CTCFP49711 727 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 ANTXR2P58335 489 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 DCAF7P61962 342 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 GABPAQ06546 454 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 PDE4BQ07343 736 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 NMIQ13287 307 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 NFIXQ14938 502 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 CCDC152Q4G0S7 254 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 KRTCAP3Q53RY4 240 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 FAM84BQ96KN1 310 aaPredicted RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 NOL10Q9BSC4 688 aaKnown RBP4.41□□□□□ -1.7
MCF2-203ENST00000370576 PAG1Q9NWQ8 432 aa4.41□□□□□ -1.7
MCF2-203ENST00000370576 ANKRD18BA2A2Z9 1011 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 H0Y626 953 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 MAP3K13O43283 966 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 SURF6O75683 361 aaKnown RBP4.4□□□□□ -1.7
MCF2-203ENST00000370576 GJB6O95452 261 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 NPTXRO95502 500 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 SOX5P35711 763 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 IRX5P78411 483 aaPredicted RBP4.4□□□□□ -1.7
MCF2-203ENST00000370576 LRRC74AQ0VAA2 488 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 SEPT7Q16181 437 aaKnown RBP4.4□□□□□ -1.7
MCF2-203ENST00000370576 NTRK3Q16288 839 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 CCNG2Q16589 344 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 MINDY4Q4G0A6 757 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 RILPL1Q5EBL4 403 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 COX20Q5RI15 118 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 CREB3L3Q68CJ9 461 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 AGBL5Q8NDL9 886 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 ZNF540Q8NDQ6 660 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 BRSK1Q8TDC3 778 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 CHCHD6Q9BRQ6 235 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 GPATCH1Q9BRR8 931 aaKnown RBP4.4□□□□□ -1.7
MCF2-203ENST00000370576 NIF3L1Q9GZT8 377 aa4.4□□□□□ -1.7
MCF2-203ENST00000370576 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.4□□□□□ -1.7
MCF2-203ENST00000370576 PIH1D3Q9NQM4 214 aaKnown RBP4.4□□□□□ -1.7
MCF2-203ENST00000370576 SH2B1Q9NRF2 756 aaPredicted RBP4.4□□□□□ -1.7
MCF2-203ENST00000370576 DISC1Q9NRI5 854 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms