RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 HSD17B3P37058 310 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 CERS5Q8N5B7 392 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 DHX36Q9H2U1 1008 aaKnown RBP11.91□□□□□ -0.5
LRIF1-201ENST00000369763 KCTD10Q9H3F6 313 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 GDF3Q9NR23 364 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 PHLPP1O60346 1717 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 KIF4AO95239 1232 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 TRIM49P0CI25 452 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 TRIM49CP0CI26 452 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 PON1P27169 355 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 USP8P40818 1118 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
LRIF1-201ENST00000369763 NBPF9Q3BBW0 867 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 TPH2Q8IWU9 490 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 MDM1Q8TC05 714 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 NAGPAQ9UK23 515 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 FBXL5Q9UKA1 691 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
LRIF1-201ENST00000369763 EEF2P13639 858 aaKnown RBP11.9□□□□□ -0.5
LRIF1-201ENST00000369763 PSMD2Q13200 908 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 PROM2Q8N271 834 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 RUSC1Q9BVN2 902 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 GANQ9H2C0 597 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 NOVA2Q9UNW9 492 aaKnown RBP11.9□□□□□ -0.5
LRIF1-201ENST00000369763 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 GCOM1H8Y6P7 765 aaPredicted RBP11.9□□□□□ -0.5
LRIF1-201ENST00000369763 SERPINB2P05120 415 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 MYZAPP0CAP1 466 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 SHMT1P34896 483 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 IRF2BP2Q7Z5L9 587 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 CAVIN3Q969G5 261 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 CCT8L2Q96SF2 557 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 NT5C3AQ9H0P0 336 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
LRIF1-201ENST00000369763 ESYT2A0FGR8 921 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 FAM86B1E9PN63 330 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 DDX39AO00148 427 aaKnown RBP11.9□□□□□ -0.51
LRIF1-201ENST00000369763 FGGP02679 453 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.51
LRIF1-201ENST00000369763 FAM86B2P0C5J1 330 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 ARHGAP4P98171 946 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 SEPT2Q15019 361 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 GLG1Q92896 1179 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 ATP6V1G3Q96LB4 118 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.51
LRIF1-201ENST00000369763 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 PCDHA2Q9Y5H9 948 aa11.9□□□□□ -0.51
LRIF1-201ENST00000369763 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 PPP1R37O75864 691 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 HOXD13P35453 343 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 IFFO1Q0D2I5 559 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 ZYXQ15942 572 aaKnown RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 GBP6Q6ZN66 633 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 MYCT1Q8N699 235 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 ZNF473Q8WTR7 871 aaKnown RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 CCDC113Q9H0I3 377 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 PCDHGC5Q9Y5F6 944 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 GIT2Q14161 759 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 KRT71Q3SY84 523 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
LRIF1-201ENST00000369763 ZNF746Q6NUN9 644 aaPredicted RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
LRIF1-201ENST00000369763 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 HGSO14964 777 aaPredicted RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 NR3C1P04150 777 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 SLC12A3P55017 1021 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 UAP1Q16222 522 aaPredicted RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 NLRP14Q86W24 1093 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 PALB2Q86YC2 1186 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 IQCDQ96DY2 449 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 SCN7AQ01118 1682 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 EML1O00423 815 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 H2AFZP0C0S5 128 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 KRT13P13646 458 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 HNRNPH1P31943 449 aaKnown RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 SLCO1A2P46721 670 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 MAGOHP61326 146 aaKnown RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 ITIH3Q06033 890 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 H2AFVQ71UI9 128 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 MAGOHBQ96A72 148 aaKnown RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 PHF20L1A8MW92 1017 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 CFBP00751 764 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 MDH1P40925 334 aaKnown RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 GALCP54803 685 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 PTGISQ16647 500 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms