RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 APBA2Q99767 749 aa19.24■□□□□ 0.67
UBE3D-203ENST00000369747 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
UBE3D-203ENST00000369747 LIMA1Q9UHB6 759 aaKnown RBP19.24■□□□□ 0.67
UBE3D-203ENST00000369747 EML1O00423 815 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 ARIH2O95376 493 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 ICAM3P32942 547 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 NCAPH2Q6IBW4 605 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 TC2NQ8N9U0 490 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 CDHR1Q96JP9 859 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 KATNBL1Q9H079 304 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 UNC45AQ9H3U1 944 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 TRIM49BA6NDI0 452 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 LRRC10BA6NIK2 292 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
UBE3D-203ENST00000369747 AMPD3Q01432 767 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 KRT31Q15323 416 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 LY6KQ17RY6 165 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 B3GNT9Q6UX72 402 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 BEGAINQ9BUH8 593 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 TEKT3Q9BXF9 490 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 TELO2Q9Y4R8 837 aa19.23■□□□□ 0.67
UBE3D-203ENST00000369747 SYNGAP1Q96PV0 1343 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 CYP2C19P33261 490 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 ASIC1P78348 528 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 PPP2R5CQ13362 524 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 TMEM119Q4V9L6 283 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 SV2BQ7L1I2 683 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 SNX29Q8TEQ0 813 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 TBC1D22BQ9NU19 505 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 WBP1LQ9NX94 342 aa19.22■□□□□ 0.67
UBE3D-203ENST00000369747 UBA1P22314 1058 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 GTF2F1P35269 517 aaKnown RBP eCLIP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 SPAG1Q07617 926 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 MCM6Q14566 821 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 PTPN14Q15678 1187 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 FILIP1LQ4L180 1135 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 TCP11X2Q5H9J9 407 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 PRAMEF19Q5SWL8 479 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 KRT79Q5XKE5 535 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 TAPT1Q6NXT6 567 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 IRF2BP1Q8IU81 584 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 LARP4BQ92615 738 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 CDK5RAP3Q96JB5 506 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 PPP1R13BQ96KQ4 1090 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 EXOC1Q9NV70 894 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 RIOK3O14730 519 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 FKTNO75072 461 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 CCNE2O96020 404 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 ADKP55263 362 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 STIM1Q13586 685 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 CEP135Q66GS9 1140 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 CCDC62Q6P9F0 684 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 CYFIP1Q7L576 1253 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 MSL3Q8N5Y2 521 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 RAD54LQ92698 747 aa19.21■□□□□ 0.67
UBE3D-203ENST00000369747 CCDC47Q96A33 483 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
UBE3D-203ENST00000369747 MYMKA6NI61 221 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 KCNJ18B7U540 433 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 DYNC1I1O14576 645 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 PSMA7O14818 248 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 IGHA2P01877 340 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 TGFB3P10600 412 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 XRCC5P13010 732 aaKnown RBP19.2■□□□□ 0.66
UBE3D-203ENST00000369747 CCT6AP40227 531 aaKnown RBP19.2■□□□□ 0.66
UBE3D-203ENST00000369747 COPB1P53618 953 aaKnown RBP19.2■□□□□ 0.66
UBE3D-203ENST00000369747 SP4Q02446 784 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 STK4Q13043 487 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 KCNJ12Q14500 433 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 ECM1Q16610 540 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 KCNK18Q7Z418 384 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 SENP7Q9BQF6 1050 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 ABHD16BQ9H3Z7 469 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 VTA1Q9NP79 307 aa19.2■□□□□ 0.66
UBE3D-203ENST00000369747 ADCYAP1R1P41586 468 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 ACVR2BQ13705 512 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 OLFML2BQ68BL8 750 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 TTI2Q6NXR4 508 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 SCFD2Q8WU76 684 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 DHTKD1Q96HY7 919 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-203ENST00000369747 JPH1Q9HDC5 661 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-203ENST00000369747 RGL1Q9NZL6 768 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 DNAH12Q6ZR08 3092 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 MED24O75448 989 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 TXNP10599 105 aaKnown RBP19.19■□□□□ 0.66
UBE3D-203ENST00000369747 CYP4A11Q02928 519 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 GJC2Q5T442 439 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-203ENST00000369747 TRIB2Q92519 343 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 COPS5Q92905 334 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 BAG1Q99933 345 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-203ENST00000369747 TAB2Q9NYJ8 693 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 SRRDQ9UH36 339 aa19.19■□□□□ 0.66
UBE3D-203ENST00000369747 ZHX1Q9UKY1 873 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-203ENST00000369747 NFASCO94856 1347 aa19.18■□□□□ 0.66
UBE3D-203ENST00000369747 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-203ENST00000369747 N4BP3O15049 544 aa19.18■□□□□ 0.66
UBE3D-203ENST00000369747 ARHGAP6O43182 974 aa19.18■□□□□ 0.66
UBE3D-203ENST00000369747 SPATA31C1P0DKV0 1188 aa19.18■□□□□ 0.66
UBE3D-203ENST00000369747 COBLL1Q53SF7 1204 aa19.18■□□□□ 0.66
UBE3D-203ENST00000369747 HYIQ5T013 277 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms