RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 GPT2Q8TD30 523 aa16.92■□□□□ 0.3
PRDM1-203ENST00000369096 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
PRDM1-203ENST00000369096 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
PRDM1-203ENST00000369096 MRFAP1Q9Y605 127 aa16.92■□□□□ 0.3
PRDM1-203ENST00000369096 ZSCAN20P17040 1043 aaPredicted RBP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 C6orf118Q5T5N4 469 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 WDR11Q9BZH6 1224 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 TRPV6Q9H1D0 765 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 TMEM206Q9H813 350 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 COPEO14579 308 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 MYO1EQ12965 1108 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 MYOM2P54296 1465 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 MEIS1O00470 390 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 NSUN2Q08J23 767 aaKnown RBP eCLIP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 CDO1Q16878 200 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 GPATCH4Q5T3I0 446 aaKnown RBP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 ALS2CLQ60I27 953 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 FAM47EQ6ZV65 393 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 ARMCX2Q7L311 632 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 OR9Q1Q8NGQ5 310 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 AK8Q96MA6 479 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 CDV3Q9UKY7 258 aaKnown RBP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 CCNA1P78396 465 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 KCNA1Q09470 495 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 SCARA5Q6ZMJ2 495 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 NAF1Q96HR8 494 aaKnown RBP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 HEXIM2Q96MH2 286 aaKnown RBP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 TEX12Q9BXU0 123 aa16.91■□□□□ 0.3
PRDM1-203ENST00000369096 APOBEC2Q9Y235 224 aaKnown RBP16.91■□□□□ 0.3
PRDM1-203ENST00000369096 DCTN3O75935 186 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 ADCY2Q08462 1091 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 SCRN1Q12765 414 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 CASP8Q14790 479 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 MORF4L2Q15014 288 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 DCPSQ96C86 337 aaKnown RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 PAPOLAP51003 745 aaKnown RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 ZBED6P86452 979 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 ARL13BQ3SXY8 428 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 TAGAPQ8N103 731 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 COG4Q9H9E3 785 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 PHLPP2Q6ZVD8 1323 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 A0A1W2PP64 1363 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 MED23Q9ULK4 1368 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 SOWAHDA6NJG2 315 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 DDIT3P35638 169 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 FRA10AC1Q70Z53 315 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 GRAMD1CQ8IYS0 662 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 ZC3H15Q8WU90 426 aaKnown RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 ANXA13P27216 316 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 NEK2P51955 445 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 GPR162Q16538 588 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 PPP6R3Q5H9R7 873 aaPredicted RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 RWDD4Q6NW29 188 aaKnown RBP16.9■□□□□ 0.3
PRDM1-203ENST00000369096 ZWILCHQ9H900 591 aa16.9■□□□□ 0.3
PRDM1-203ENST00000369096 IKBKBO14920 756 aa16.89■□□□□ 0.3
PRDM1-203ENST00000369096 SLITRK6Q9H5Y7 841 aa16.89■□□□□ 0.3
PRDM1-203ENST00000369096 NHEJ1Q9H9Q4 299 aaPredicted RBP16.89■□□□□ 0.3
PRDM1-203ENST00000369096 A0A087WWV3 80 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 ARHGEF37A1IGU5 675 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 ELF1P32519 619 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 NFU1Q9UMS0 254 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 ZSCAN9O15535 394 aaPredicted RBP16.89■□□□□ 0.29
PRDM1-203ENST00000369096 KCNA6P17658 529 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 KRT4P19013 534 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 NFKBIAP25963 317 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 CDC25AP30304 524 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 FAF2Q96CS3 445 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 FOXP1Q9H334 677 aaPredicted RBP16.89■□□□□ 0.29
PRDM1-203ENST00000369096 GTSE1Q9NYZ3 720 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 STX18Q9P2W9 335 aaKnown RBP16.89■□□□□ 0.29
PRDM1-203ENST00000369096 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 ANKRD65E5RJM6 399 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 PPP6R2O75170 966 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 HADHAP40939 763 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 RWDD2BP57060 319 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 ZNF658Q5TYW1 1059 aaPredicted RBP16.89■□□□□ 0.29
PRDM1-203ENST00000369096 CCDC17Q96LX7 622 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 SAYSD1Q9NPB0 183 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
PRDM1-203ENST00000369096 SNX2O60749 519 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 MIS18BP1Q6P0N0 1132 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 NDUFAF2Q8N183 169 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 KIF1BO60333 1816 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 CREB3O43889 395 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 DNAJC6O75061 913 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 SLC26A7Q8TE54 656 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 ULK4Q96C45 1275 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 PPP1R16BQ96T49 567 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
PRDM1-203ENST00000369096 ABCC12Q96J65 1359 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 ATP8B3O60423 1300 aa16.88■□□□□ 0.29
PRDM1-203ENST00000369096 CDC25BP30305 580 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms