RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 RBM47A0AV96 593 aaKnown RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 ARHGEF35A5YM69 484 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 SNAI1O95863 264 aaPredicted RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 HSPA6P17066 643 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 RARRES1P49788 294 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 TPM4P67936 248 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 RAD51AP2Q09MP3 1159 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 PAK1Q13153 545 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 SWSAP1Q6NVH7 229 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 TAPT1Q6NXT6 567 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 REM2Q8IYK8 340 aaPredicted RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 MSL3Q8N5Y2 521 aaKnown RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 SCFD2Q8WU76 684 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 USP6NLQ92738 828 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 PDLIM2Q96JY6 352 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 SLC39A2Q9NP94 309 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 PDGFCQ9NRA1 345 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 ANKEF1Q9NU02 776 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 ZNF862O60290 1169 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 HOXC6P09630 235 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 CCDC173Q0VFZ6 552 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 STIM1Q13586 685 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 TTLL4Q14679 1199 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 CELF3Q5SZQ8 465 aaKnown RBP26.54■■□□□ 1.84
SNX3-203ENST00000368979 NELFBQ8WX92 580 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 MAPK8IP1Q9UQF2 711 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 PCDHA2Q9Y5H9 948 aa26.54■■□□□ 1.84
SNX3-203ENST00000368979 GSTTP1A0A1W2PQM5 241 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 STBD1O95210 358 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 GUCY2CP25092 1073 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 STX17P56962 302 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 PLCB2Q00722 1185 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 FAM26FQ5R3K3 315 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 SPATA1Q5VX52 437 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 DHTKD1Q96HY7 919 aaPredicted RBP26.53■■□□□ 1.84
SNX3-203ENST00000368979 PPP1R9BQ96SB3 815 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 TINF2Q9BSI4 451 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 MLXIPQ9HAP2 919 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 NFE2L3Q9Y4A8 694 aa26.53■■□□□ 1.84
SNX3-203ENST00000368979 ADCY5O95622 1261 aa26.52■■□□□ 1.84
SNX3-203ENST00000368979 TXNP10599 105 aaKnown RBP26.52■■□□□ 1.84
SNX3-203ENST00000368979 FANCLQ9NW38 375 aa26.52■■□□□ 1.84
SNX3-203ENST00000368979 MAFBQ9Y5Q3 323 aaPredicted RBP26.52■■□□□ 1.84
SNX3-203ENST00000368979 ARID2Q68CP9 1835 aa26.52■■□□□ 1.84
SNX3-203ENST00000368979 MGAMO43451 1857 aa26.52■■□□□ 1.84
SNX3-203ENST00000368979 PSMA7O14818 248 aa26.51■■□□□ 1.83
SNX3-203ENST00000368979 HERC4Q5GLZ8 1057 aaPredicted RBP26.51■■□□□ 1.83
SNX3-203ENST00000368979 PADI6Q6TGC4 694 aa26.51■■□□□ 1.83
SNX3-203ENST00000368979 ANO5Q75V66 913 aa26.51■■□□□ 1.83
SNX3-203ENST00000368979 ZNF302Q9NR11 478 aa26.51■■□□□ 1.83
SNX3-203ENST00000368979 ODF2LQ9ULJ1 636 aa26.51■■□□□ 1.83
SNX3-203ENST00000368979 RSPH10B2B2RC85 870 aa26.5■■□□□ 1.83
SNX3-203ENST00000368979 BACH1O14867 736 aa26.5■■□□□ 1.83
SNX3-203ENST00000368979 TBCAO75347 108 aaKnown RBP26.5■■□□□ 1.83
SNX3-203ENST00000368979 ECM2O94769 699 aaPredicted RBP26.5■■□□□ 1.83
SNX3-203ENST00000368979 RSPH10BP0C881 870 aa26.5■■□□□ 1.83
SNX3-203ENST00000368979 PRKCEQ02156 737 aa26.5■■□□□ 1.83
SNX3-203ENST00000368979 GUF1Q8N442 669 aaKnown RBP26.5■■□□□ 1.83
SNX3-203ENST00000368979 SOCS4Q8WXH5 440 aa26.5■■□□□ 1.83
SNX3-203ENST00000368979 SEPT1Q8WYJ6 367 aa26.5■■□□□ 1.83
SNX3-203ENST00000368979 TMEM150BA6NC51 233 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 ZNF18P17022 549 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 GAP43P17677 238 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 CTGFP29279 349 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 ZNF131P52739 623 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 TMEM63BQ5T3F8 832 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 UTP14CQ5TAP6 766 aaKnown RBP26.49■■□□□ 1.83
SNX3-203ENST00000368979 SFR1Q86XK3 245 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 DHX37Q8IY37 1157 aaKnown RBP26.49■■□□□ 1.83
SNX3-203ENST00000368979 AFAP1L1Q8TED9 768 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 COPS5Q92905 334 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 PCYT2Q99447 389 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 GPR20Q99678 358 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 GJD2Q9UKL4 321 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 COL4A3BPQ9Y5P4 624 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 TNPO2O14787 897 aaKnown RBP26.49■■□□□ 1.83
SNX3-203ENST00000368979 CCNE1P24864 410 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 PLA2G4FQ68DD2 849 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 OTUD6AQ7L8S5 288 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 GLIS3Q8NEA6 775 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 FGFBP2Q9BYJ0 223 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 ABHD16BQ9H3Z7 469 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 ZHX3Q9H4I2 956 aa26.49■■□□□ 1.83
SNX3-203ENST00000368979 FAM13AO94988 1023 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 ATP1A3P13637 1013 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 ATP4AP20648 1035 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 TCF7P36402 384 aaPredicted RBP26.48■■□□□ 1.83
SNX3-203ENST00000368979 RGS2P41220 211 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 PMS1P54277 932 aaKnown RBP26.48■■□□□ 1.83
SNX3-203ENST00000368979 MAPK7Q13164 816 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 IRF5Q13568 498 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 HSDL1Q3SXM5 330 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 XKR9Q5GH70 373 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 XKR3Q5GH77 459 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 P2RX5Q93086 422 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 CCDC43Q96MW1 224 aaKnown RBP26.48■■□□□ 1.83
SNX3-203ENST00000368979 OLFML3Q9NRN5 406 aa26.48■■□□□ 1.83
SNX3-203ENST00000368979 TRIM49BA6NDI0 452 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 ZNF75DP51815 510 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 NPEPPSP55786 919 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms