RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 OLFML3Q9NRN5 406 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 VAV3Q9UKW4 847 aa15.66■□□□□ 0.1
CD48-201ENST00000368045 A0A0A6YYK5 440 aaPredicted RBP15.65■□□□□ 0.1
CD48-201ENST00000368045 F5H6K3 240 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 PIK3CDO00329 1044 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 EIF3DO15371 548 aaKnown RBP eCLIP15.65■□□□□ 0.1
CD48-201ENST00000368045 FLOT1O75955 427 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 NR3C1P04150 777 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 PON1P27169 355 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 HOXD13P35453 343 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 PDE6BP35913 854 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 PTK2Q05397 1052 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 KLRC3Q07444 240 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 RPS6KA1Q15418 735 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 STRIP1Q5VSL9 837 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 SIAH1Q8IUQ4 282 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 CD302Q8IX05 232 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 NLGN1Q8N2Q7 840 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 USP38Q8NB14 1042 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 C1orf131Q8NDD1 294 aaKnown RBP15.65■□□□□ 0.1
CD48-201ENST00000368045 LMBR1Q8WVP7 490 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 RASSF4Q9H2L5 321 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 FAM198AQ9UFP1 575 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 TMEM59LQ9UK28 342 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 NENFQ9UMX5 172 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 DAAM1Q9Y4D1 1078 aa15.65■□□□□ 0.1
CD48-201ENST00000368045 RAD21O60216 631 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 NDUFB10O96000 172 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 MYBP10242 640 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 PSMC6P62333 389 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 SKOR1P84550 965 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 ARID5AQ03989 594 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 ZNF571Q7Z3V5 609 aaPredicted RBP15.64■□□□□ 0.1
CD48-201ENST00000368045 FMNL3Q8IVF7 1028 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 TSEN2Q8NCE0 465 aaKnown RBP15.64■□□□□ 0.1
CD48-201ENST00000368045 ZBTB9Q96C00 473 aa15.64■□□□□ 0.1
CD48-201ENST00000368045 CALR3Q96L12 384 aaKnown RBP15.64■□□□□ 0.1
CD48-201ENST00000368045 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.1
CD48-201ENST00000368045 ASTN1O14525 1302 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 DDTLA6NHG4 134 aaPredicted RBP15.64■□□□□ 0.09
CD48-201ENST00000368045 FAM86B1E9PN63 330 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 MSH4O15457 936 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 AKAP3O75969 853 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 GLI1P08151 1106 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 FAM86B2P0C5J1 330 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 SLC9A1P19634 815 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 MUTP22033 750 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 IRAK1P51617 712 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 JAM2P57087 298 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 ABCB5Q2M3G0 1257 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 ACTRT1Q8TDG2 376 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 MASTLQ96GX5 879 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 CAPS2Q9BXY5 557 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 PACSIN1Q9BY11 444 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 EPB41L5Q9HCM4 733 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 TUFT1Q9NNX1 390 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 NAGPAQ9UK23 515 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 UBE4BO95155 1302 aa15.64■□□□□ 0.09
CD48-201ENST00000368045 MEIS1O00470 390 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 KIF4AO95239 1232 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 BMP3P12645 472 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 ACTN1P12814 892 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 FERP16591 822 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 CARSP49589 748 aaKnown RBP15.63■□□□□ 0.09
CD48-201ENST00000368045 NPEPPSP55786 919 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 GUCY2DQ02846 1103 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 DNAJC21Q5F1R6 531 aaKnown RBP15.63■□□□□ 0.09
CD48-201ENST00000368045 CFAP58Q5T655 872 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 ALKBH5Q6P6C2 394 aaKnown RBP15.63■□□□□ 0.09
CD48-201ENST00000368045 SH3BP5LQ7L8J4 393 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 IQCKQ8N0W5 287 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 LRRC57Q8N9N7 239 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 TRERF1Q96PN7 1200 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 EIF2AK1Q9BQI3 630 aaKnown RBP15.63■□□□□ 0.09
CD48-201ENST00000368045 MKNK1Q9BUB5 465 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 SEL1LQ9UBV2 794 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 TRPC5Q9UL62 973 aaPredicted RBP15.63■□□□□ 0.09
CD48-201ENST00000368045 COL2A1P02458 1487 aaPredicted RBP15.63■□□□□ 0.09
CD48-201ENST00000368045 ATRNL1Q5VV63 1379 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 ANKRD31Q8N7Z5 1873 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
CD48-201ENST00000368045 PPP1R12BO60237 982 aaPredicted RBP15.62■□□□□ 0.09
CD48-201ENST00000368045 IKQ13123 557 aaPredicted RBP15.62■□□□□ 0.09
CD48-201ENST00000368045 MEX3CQ5U5Q3 659 aaKnown RBP15.62■□□□□ 0.09
CD48-201ENST00000368045 EMC10Q5UCC4 262 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 SYCE1Q8N0S2 351 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 KRT12Q99456 494 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 BHMT2Q9H2M3 363 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 SIX2Q9NPC8 291 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 RSPH14Q9UHP6 348 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 LCMT1Q9UIC8 334 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 SIPA1L1O43166 1804 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 ENTPD3O75355 529 aa15.62■□□□□ 0.09
CD48-201ENST00000368045 GCNT3O95395 438 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms