RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ITFG2Q969R8 447 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 EEF2KMTQ96G04 330 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 HOMER2Q9NSB8 354 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 A0A1W2PQJ5 194 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 OPLAHO14841 1288 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 CNTFP26441 200 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KRT17Q04695 432 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 HLTFQ14527 1009 aaKnown RBP eCLIP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TTC30AQ86WT1 665 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 TTC30BQ8N4P2 665 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PHF23Q9BUL5 403 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SNX25Q9H3E2 840 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 KDM5CP41229 1560 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PTCH1Q13635 1447 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 WDR46O15213 610 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MRPS14O60783 128 aaKnown RBP4.04□□□□□ -1.76
SYNE1-207ENST00000367255 STAMQ92783 540 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 ATP8A1Q9Y2Q0 1164 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 BFSP2Q13515 415 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 RCN1Q15293 331 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SURF1Q15526 300 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 SEL1L2Q5TEA6 688 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 BSNDQ8WZ55 320 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 COPG2Q9UBF2 871 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 STRIP2Q9ULQ0 834 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MAPK8IP1Q9UQF2 711 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 NR2E3Q9Y5X4 410 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 MAST3O60307 1309 aa4.04□□□□□ -1.76
SYNE1-207ENST00000367255 PABPN1LA6NDY0 278 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 FAM187AA6NFU0 413 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 COPB2P35606 906 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ZCWPW2Q504Y3 356 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 C8orf74Q6P047 294 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM72Q6ZMU5 477 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 SLC22A15Q8IZD6 547 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 VWA5AO00534 786 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 VIL1P09327 827 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 TGFBR2P37173 567 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 HECTD3Q5T447 861 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 YTHDF1Q9BYJ9 559 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ATP6V1HQ9UI12 483 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PRR12Q9ULL5 1215 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PTPRTO14522 1441 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ZCWPW1Q9H0M4 648 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PDE11AQ9HCR9 933 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 VPS45Q9NRW7 570 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 BTBD7Q9P203 1132 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 EXOC6BQ9Y2D4 811 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PEX1O43933 1283 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 FOSP01100 380 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 SMURF2Q9HAU4 748 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 FKBP4Q02790 459 aaKnown RBP eCLIP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ASB13Q8WXK3 278 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 CLIC6Q96NY7 704 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 BRD8Q9H0E9 1235 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 RACGAP1Q9H0H5 632 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 FBXO28Q9NVF7 368 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 FAM169AQ9Y6X4 670 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 TWISTNBQ3B726 338 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PPP1R18Q6NYC8 613 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ATG14Q6ZNE5 492 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 STRA8Q7Z7C7 330 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PDZD8Q8NEN9 1154 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 NMD3Q96D46 503 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 SLAIN2Q9P270 581 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ADAM21Q9UKJ8 722 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 TMED5Q9Y3A6 229 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 BTBD18B2RXH4 712 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ARHGEF2Q92974 986 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC177Q9NQR7 707 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 SCAMP1O15126 338 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 NOS1APO75052 506 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 HIRAP54198 1017 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 RABGEF1Q9UJ41 708 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 NCOA3Q9Y6Q9 1424 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 GPATCH8Q9UKJ3 1502 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 DCTN2Q13561 401 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 NAF1Q96HR8 494 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC85CA6NKD9 419 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 THRSPQ92748 146 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 BTBD6Q96KE9 485 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 CCNB1IP1Q9NPC3 277 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 SERPINB1P30740 379 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC126Q96EE4 140 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PRRG3Q9BZD7 231 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 JCADQ9P266 1359 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 TBCAO75347 108 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 ABCE1P61221 599 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 SSU72Q9NP77 194 aaKnown RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 NDUFB9Q9Y6M9 179 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 LDOC1O95751 146 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PARP10Q53GL7 1025 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 WASHC2DQ5SRD0 308 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 OTUD5Q96G74 571 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 MEGF6O75095 1541 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 A0A0D9SFI3 127 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 BAIAP3O94812 1187 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 VNN2O95498 520 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 PEPDP12955 493 aa4.03□□□□□ -1.76
SYNE1-207ENST00000367255 LRMPQ12912 555 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms