RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 DUSP6Q16828 381 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 QRICH1Q2TAL8 776 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 RRP12Q5JTH9 1297 aaKnown RBP9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 DGLUCYQ7Z3D6 616 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 VSIG10LQ86VR7 867 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 ADGRF4Q8IZF3 695 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 GPR179Q6PRD1 2367 aa9.92□□□□□ -0.82
HMGB1P39-201ENST00000366304 PLXNA4Q9HCM2 1894 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 TTC3P53804 2025 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 FSCN2O14926 492 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 NPR3P17342 541 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 HSD17B4P51659 736 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 ARHGAP4P98171 946 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 APOBRQ0VD83 1088 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 TSR1Q2NL82 804 aaKnown RBP9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 PROX2Q3B8N5 592 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 NAALADL2Q58DX5 795 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 FBXO47Q5MNV8 452 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 ANKRD54Q6NXT1 300 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 PI4K2BQ8TCG2 481 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 SLC4A5Q9BY07 1137 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 JMJD4Q9H9V9 463 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 PNMA2Q9UL42 364 aa9.91□□□□□ -0.82
HMGB1P39-201ENST00000366304 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 HIDE1A8MVS5 230 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 CFBP00751 764 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 WEE2P0C1S8 567 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 HSPD1P10809 573 aaKnown RBP9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 HOXA13P31271 388 aaPredicted RBP9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 CD52P31358 61 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 TECP42680 631 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 GHRHRQ02643 423 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 PGM5Q15124 567 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 MARCH8Q5T0T0 291 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 LLGL2Q6P1M3 1020 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 STOX1Q6ZVD7 989 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 TBC1D10CQ8IV04 446 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 KIAA2013Q8IYS2 634 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 PPP2R3CQ969Q6 453 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 GPR20Q99678 358 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 ZKSCAN3Q9BRR0 538 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 POMKQ9H5K3 350 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 SORCS3Q9UPU3 1222 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 BAHCC1Q9P281 2608 aa9.9□□□□□ -0.82
HMGB1P39-201ENST00000366304 MAP1BP46821 2468 aaKnown RBP9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 FGAP02671 866 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 MRPS9P82933 396 aaKnown RBP9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 MTMR3Q13615 1198 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 KANK3Q6NY19 840 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 CYFIP1Q7L576 1253 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 TMX1Q9H3N1 280 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 MLXIPQ9HAP2 919 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 TOMM22Q9NS69 142 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 CDY2AQ9Y6F7 541 aa9.89□□□□□ -0.83
HMGB1P39-201ENST00000366304 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 CLCN5P51795 746 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 HAND2P61296 217 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 ANGPT1Q15389 498 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 ALX1Q15699 326 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 GPATCH4Q5T3I0 446 aaKnown RBP9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 UTP14CQ5TAP6 766 aaKnown RBP9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 TSHZ1Q6ZSZ6 1077 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 NPAS4Q8IUM7 802 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 CCDC105Q8IYK2 499 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 MICAL1Q8TDZ2 1067 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 DNAJB3Q8WWF6 145 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 TTC14Q96N46 770 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 MAF1Q9H063 256 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 VAT1LQ9HCJ6 419 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 DLL3Q9NYJ7 618 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 RALYQ9UKM9 306 aaKnown RBP9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 MRPL11Q9Y3B7 192 aaKnown RBP9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 R4GN57 208 aa9.88□□□□□ -0.83
HMGB1P39-201ENST00000366304 NEDD4P46934 1319 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 CCDC171Q6TFL3 1326 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 MBLAC1A4D2B0 266 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 SPATA31C2B4DYI2 1134 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 MGEA5O60502 916 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 FGF18O76093 207 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 TGFB3P10600 412 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 FAM102BQ5T8I3 360 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 PLPP4Q5VZY2 271 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 KCNV1Q6PIU1 500 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 METTL7BQ6UX53 244 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 STAG2Q8N3U4 1231 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 DCLK2Q8N568 766 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 FLCNQ8NFG4 579 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 USP26Q9BXU7 913 aa9.87□□□□□ -0.83
HMGB1P39-201ENST00000366304 AAASQ9NRG9 546 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms