RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 SLC39A14Q15043 492 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 ADALQ6DHV7 355 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 KCTD1Q719H9 257 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 RNF135Q8IUD6 432 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 CCDC12Q8WUD4 166 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 EDAQ92838 391 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 WNT8BQ93098 351 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 PBXIP1Q96AQ6 731 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 LOXHD1Q8IVV2 1947 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 A6NJR5 290 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 NFIBO00712 420 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 ARIH2O95376 493 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 ALDH5A1P51649 535 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 IKQ13123 557 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 NR5A1Q13285 461 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 IKBKEQ14164 716 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 MBTPS1Q14703 1052 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 PTPAQ15257 358 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 WWC2Q6AWC2 1192 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 NSMFQ6X4W1 530 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 CLDND1Q9NY35 253 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 PRR12Q9ULL5 1215 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 PCDHA7Q9UN72 937 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 PCDHA4Q9UN74 947 aa12.73□□□□□ -0.37
CSNK1E-202ENST00000366216 DMXL1Q9Y485 3027 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 LOC102724159A0A0B4J2E5 919 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 TMEM221A6NGB7 291 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 H3BNC9 293 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 M0R296 226 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 STXBP3O00186 592 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 NKRFO15226 690 aaKnown RBP eCLIP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 CKBP12277 381 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 LIG1P18858 919 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 LTBRP36941 435 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 ME1P48163 572 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 TRAPPC10P48553 1259 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 TOB1P50616 345 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 RBL2Q08999 1139 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 PWP2Q15269 919 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 TTBK2Q6IQ55 1244 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 TRIM67Q6ZTA4 783 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 KAT2BQ92831 832 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 OSBPL7Q9BZF2 842 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 FAM86C1Q9NVL1 165 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 CEP131Q9UPN4 1083 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 PLXNA4Q9HCM2 1894 aa12.72□□□□□ -0.37
CSNK1E-202ENST00000366216 ESYT2A0FGR8 921 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 M0R2N6 131 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 NCK2O43639 380 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 BMP15O95972 392 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 HTRA4P83105 476 aaPredicted RBP12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 HIC1Q14526 733 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 CLUL1Q15846 466 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 CCDC96Q2M329 555 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 L1TD1Q5T7N2 865 aaKnown RBP12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 SLC30A10Q6XR72 485 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 RPAINQ86UA6 219 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.372e-6■■□□□ 13
CSNK1E-202ENST00000366216 PIGSQ96S52 555 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 GPCPD1Q9NPB8 672 aa12.71□□□□□ -0.37
CSNK1E-202ENST00000366216 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms