RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SMAD2Q15796 467 aaKnown RBP4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 SEPT7Q16181 437 aaKnown RBP4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 RGL3Q3MIN7 710 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 FAM26FQ5R3K3 315 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 CREB3L3Q68CJ9 461 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 LRSAM1Q6UWE0 723 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 TTLL10Q6ZVT0 673 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 NXPE1Q8N323 547 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 NUDT10Q8NFP7 164 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 NUDT11Q96G61 164 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 YTHDC1Q96MU7 727 aaKnown RBP4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 GBP4Q96PP9 640 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 ORAI3Q9BRQ5 295 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 AMNQ9BXJ7 453 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 ADAM7Q9H2U9 754 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 INCENPQ9NQS7 918 aa4.66□□□□□ -1.66
RNU4-48P-201ENST00000365559 A0A0G2JLL6 359 aaPredicted RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 PRAMEF22A3QJZ6 481 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 H7C1D1 291 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 PDE8AO60658 829 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 KLHL18O94889 574 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 F2P00734 622 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 MYCLP1P12525 358 aaPredicted RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 ATP2A2P16615 1042 aaKnown RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 PTX3P26022 381 aaPredicted RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 KIF11P52732 1056 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 GJA9P57773 515 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 DSG1Q02413 1049 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 PPM1KQ8N3J5 372 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 KIAA1958Q8N8K9 716 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 HIPK4Q8NE63 616 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 ERCC4Q92889 916 aaPredicted RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 OXSMQ9NWU1 459 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 GALNT8Q9NY28 637 aa4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 H2AFY2Q9P0M6 372 aaPredicted RBP4.65□□□□□ -1.67
RNU4-48P-201ENST00000365559 BTBD11A6QL63 1104 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 GOLGA6L22H0YM25 854 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 CYP1A1P04798 512 aaPredicted RBP4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 CHGBP05060 677 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 SLC9A1P19634 815 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 IL13RA1P78552 427 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 RTN4RL1Q86UN2 441 aaPredicted RBP4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 KIF18BQ86Y91 864 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 CHTF18Q8WVB6 975 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 FOXRED1Q96CU9 486 aaPredicted RBP4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 MBD6Q96DN6 1003 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 C20orf173Q96LM9 149 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 ELF4Q99607 663 aaPredicted RBP4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 TMEM168Q9H0V1 697 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 PCIF1Q9H4Z3 704 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 USP40Q9NVE5 1235 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 THG1LQ9NWX6 298 aaKnown RBP4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 FTSJ1Q9UET6 329 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 ASB1Q9Y576 335 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 DUSP10Q9Y6W6 482 aa4.64□□□□□ -1.67
RNU4-48P-201ENST00000365559 MROH6A6NGR9 719 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 H0Y858 1186 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 GAS7O60861 476 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 ECE1P42892 770 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 STILQ15468 1287 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 ESRP1Q6NXG1 681 aaKnown RBP4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 FRMD5Q7Z6J6 570 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 THNSL2Q86YJ6 484 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 AHI1Q8N157 1196 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 SMC1BQ8NDV3 1235 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 LEO1Q8WVC0 666 aaPredicted RBP4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 LCORQ96JN0 433 aaPredicted RBP4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 SLKQ9H2G2 1235 aaPredicted RBP4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 ACSS2Q9NR19 701 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 IFT57Q9NWB7 429 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 ZKSCAN5Q9Y2L8 839 aa4.63□□□□□ -1.67
RNU4-48P-201ENST00000365559 C9orf118A6NHY6 69 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 PRICKLE3O43900 615 aaPredicted RBP4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 B4GALT3O60512 393 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 ADCY8P40145 1251 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 MASP1P48740 699 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 FNTBP49356 437 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 CD83Q01151 205 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 NFATC3Q12968 1075 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 ZNF174Q15697 407 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 WDR72Q3MJ13 1102 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 EGFLAMQ63HQ2 1017 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 KANK2Q63ZY3 851 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 DPP8Q6V1X1 898 aaPredicted RBP4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 Q6ZUG5 572 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 RNF180Q86T96 592 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 FERMT3Q86UX7 667 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 UBR7Q8N806 425 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 C16orf92Q96LL3 132 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 BTBD2Q9BX70 525 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 OR10A5Q9H207 317 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 TOMM22Q9NS69 142 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 MAPRE3Q9UPY8 281 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 SPO11Q9Y5K1 396 aa4.62□□□□□ -1.67
RNU4-48P-201ENST00000365559 TGM5O43548 720 aa4.61□□□□□ -1.67
RNU4-48P-201ENST00000365559 CYP17A1P05093 508 aa4.61□□□□□ -1.67
RNU4-48P-201ENST00000365559 CNR2P34972 360 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms