RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 DLG3Q92796 817 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 GBP4Q96PP9 640 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 WRNIP1Q96S55 665 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 BDH2Q9BUT1 245 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 AMNQ9BXJ7 453 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 KCNH7Q9NS40 1196 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 PTPN22Q9Y2R2 807 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 B3GALT1Q9Y5Z6 326 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 PTPDC1A2A3K4 754 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 RFPL3O75679 317 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 NPTXRO95502 500 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 MPIG6BO95866 241 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 NFATC3Q12968 1075 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 CFAP100Q494V2 611 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 CNNM4Q6P4Q7 775 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 GPR155Q7Z3F1 870 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 INCENPQ9NQS7 918 aa6.68□□□□□ -1.34
RNU4-28P-201ENST00000364739 FAM83GA6ND36 823 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 B4E1Z4 1266 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 H0Y858 1186 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 FOXP2O15409 715 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 CDC45O75419 566 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 ADCY8P40145 1251 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 IL13RA1P78552 427 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 SKOR2Q2VWA4 1001 aaPredicted RBP6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 CATSPEREQ5SY80 951 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 ZFYVE27Q5T4F4 411 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 OTOP1Q7RTM1 612 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 FAM124AQ86V42 546 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 KBTBD2Q8IY47 623 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 CHST14Q8NCH0 376 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 HIPK4Q8NE63 616 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 CXorf38Q8TB03 319 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 PTPN18Q99952 460 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 BOCQ9BWV1 1114 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 GALNT8Q9NY28 637 aa6.67□□□□□ -1.34
RNU4-28P-201ENST00000364739 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 KPNA6O60684 536 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 HIP1RO75146 1068 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 NEK4P51957 841 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 HERVK_113P62684 666 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 PLP2Q04941 152 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 WDR72Q3MJ13 1102 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 TBC1D10BQ4KMP7 808 aaPredicted RBP6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 GIMAP6Q6P9H5 292 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 BORAQ6PGQ7 559 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 Q6ZUG5 572 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 UBE2R2Q712K3 238 aaPredicted RBP6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 LGI4Q8N135 537 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 NXPE1Q8N323 547 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 MTFR1LQ9H019 292 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 BARX1Q9HBU1 254 aaPredicted RBP6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 MAGEC2Q9UBF1 373 aaPredicted RBP6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
RNU4-28P-201ENST00000364739 CBX4O00257 560 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 ZNF888P0CJ79 500 aaPredicted RBP6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 KIF11P52732 1056 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 PCBP1Q15365 356 aaKnown RBP eCLIP6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 DALRD3Q5D0E6 543 aaKnown RBP6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 LIMS2Q7Z4I7 341 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 LRRTM3Q86VH5 581 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 KLHL36Q8N4N3 616 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 NINJ1Q92982 152 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 CABP5Q9NP86 173 aa6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 H2AFY2Q9P0M6 372 aaPredicted RBP6.65□□□□□ -1.34
RNU4-28P-201ENST00000364739 ZNF536O15090 1300 aa6.65□□□□□ -1.35
RNU4-28P-201ENST00000364739 GOLGA6L22H0YM25 854 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 CHGBP05060 677 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 SLC9A1P19634 815 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 PTX3P26022 381 aaPredicted RBP6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 FLT3P36888 993 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 ECE1P42892 770 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 CD83Q01151 205 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 NOLC1Q14978 699 aaKnown RBP eCLIP6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 ARHGAP44Q17R89 818 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 NIM1KQ8IY84 436 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 SYNPOQ8N3V7 929 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 B4GALT6Q9UBX8 382 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 ADAM29Q9UKF5 820 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 TBX22Q9Y458 520 aa6.64□□□□□ -1.35
RNU4-28P-201ENST00000364739 ZNF891A8MT65 544 aaPredicted RBP6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 CELA3BP08861 270 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 SDHAP31040 664 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 CSF2RBP32927 897 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 RANGAP1P46060 587 aaPredicted RBP6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 KCNQ1P51787 676 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 RRADP55042 308 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 DPP8Q6V1X1 898 aaPredicted RBP6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 NOP9Q86U38 636 aaKnown RBP6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 FOXRED1Q96CU9 486 aaPredicted RBP6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 AJUBAQ96IF1 538 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 MAGEL2Q9UJ55 1249 aa6.63□□□□□ -1.35
RNU4-28P-201ENST00000364739 ATP2A2P16615 1042 aaKnown RBP6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 TOP3AQ13472 1001 aaPredicted RBP6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 CC2D1AQ6P1N0 951 aaPredicted RBP6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 RTN4RL1Q86UN2 441 aaPredicted RBP6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 KIAA1958Q8N8K9 716 aa6.62□□□□□ -1.35
RNU4-28P-201ENST00000364739 RBM15Q96T37 977 aaKnown RBP eCLIP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms