RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 GSCP56915 257 aaPredicted RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 COASYQ13057 564 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 MOB2Q70IA6 237 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 PPP1R13BQ96KQ4 1090 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 TAAR1Q96RJ0 339 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 CD248Q9HCU0 757 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 ZNF541Q9H0D2 1346 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 ZBTB39O15060 712 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 MED24O75448 989 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 VCAM1P19320 739 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 CDC25BP30305 580 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 PSMC6P62333 389 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 DBN1Q16643 649 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 UNC13DQ70J99 1090 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 KSR1Q8IVT5 923 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 DHTKD1Q96HY7 919 aaPredicted RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 TACO1Q9BSH4 297 aaKnown RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 TUBGCP6Q96RT7 1819 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 LAMA4Q16363 1823 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 ARP10275 920 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 MTF1Q14872 753 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 BRD3Q15059 726 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 KIAA1755Q5JYT7 1200 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 B4GALNT4Q76KP1 1039 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 CATSPER3Q86XQ3 398 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 MKL1Q969V6 931 aa10.04□□□□□ -0.8
CALD1-202ENST00000361901 THOC1Q96FV9 657 aaKnown RBP10.04□□□□□ -0.8
CALD1-202ENST00000361901 K7ENM7 598 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 MEIS2O14770 477 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 WDR46O15213 610 aaKnown RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 TBC1D8O95759 1140 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 PMS1P54277 932 aaKnown RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 ANKRD13CQ8N6S4 541 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 GMCL1P1Q8NEA9 526 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 FAM71BQ8TC56 605 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 GLG1Q92896 1179 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 PDIA5Q14554 519 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 PTPROQ16827 1216 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 ZFYVE27Q5T4F4 411 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 SIAH1Q8IUQ4 282 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 PSMB7Q99436 277 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 WDR11Q9BZH6 1224 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 SUGCTQ9HAC7 445 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 JADE2Q9NQC1 790 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 NOP56O00567 594 aaKnown RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 EPB41P11171 864 aaKnown RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 KRT13P13646 458 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 RPL13P26373 211 aaKnown RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 CYLC1P35663 651 aaPredicted RBP10.03□□□□□ -0.8
CALD1-202ENST00000361901 DNM2P50570 870 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 CCDC122Q5T0U0 273 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 MFSD4BQ5TF39 518 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 PPP4R3AQ6IN85 833 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 ADSSL1Q8N142 457 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 CAPZA3Q96KX2 299 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 FAM20AQ96MK3 541 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 MTRQ99707 1265 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 YIPF3Q9GZM5 350 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 MAGEF1Q9HAY2 307 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 PPP2R2CQ9Y2T4 447 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 CACNA1SQ13698 1873 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 THSD7AQ9UPZ6 1657 aa10.03□□□□□ -0.8
CALD1-202ENST00000361901 IGKV6D-41A0A0C4DH26 115 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 RSPH10B2B2RC85 870 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 BUB1BO60566 1050 aaPredicted RBP10.02□□□□□ -0.8
CALD1-202ENST00000361901 RSPH10BP0C881 870 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 SNHG28P0DPA3 235 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 COG2Q14746 738 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 C4orf32Q8N8J7 132 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 GLIS3Q8NEA6 775 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 OR8K1Q8NGG5 319 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 ITFG2Q969R8 447 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 ZNF668Q96K58 619 aaPredicted RBP10.02□□□□□ -0.8
CALD1-202ENST00000361901 LXNQ9BS40 222 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 FRMD4BQ9Y2L6 1034 aa10.02□□□□□ -0.8
CALD1-202ENST00000361901 ARHGAP25P42331 645 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 FKBP3Q00688 224 aaKnown RBP10.02□□□□□ -0.81
CALD1-202ENST00000361901 CCDC121Q6ZUS5 278 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 SCYL3Q8IZE3 742 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 HAS1Q92839 578 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 CCDC127Q96BQ5 260 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 GDAP1L1Q96MZ0 367 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 NACC1Q96RE7 527 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 LSM14BQ9BX40 385 aaKnown RBP10.02□□□□□ -0.81
CALD1-202ENST00000361901 MLXIPQ9HAP2 919 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 ARMCX3Q9UH62 379 aaPredicted RBP10.02□□□□□ -0.81
CALD1-202ENST00000361901 CCDC88AQ3V6T2 1871 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 CCDC151A5D8V7 595 aa10.02□□□□□ -0.81
CALD1-202ENST00000361901 MARK3P27448 753 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms