RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 RNF40O75150 1001 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 CSPG5O95196 566 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 CDC25CP30307 473 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 PSMC1P62191 440 aaKnown RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 NLRX1Q86UT6 975 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 IQCF2Q8IXL9 164 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 PPFIBP2Q8ND30 876 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 AMNQ9BXJ7 453 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 PDGFDQ9GZP0 370 aaPredicted RBP10.78□□□□□ -0.68
SIN3A-201ENST00000360439 VPS16Q9H269 839 aa10.78□□□□□ -0.68
SIN3A-201ENST00000360439 SLIT2O94813 1529 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 NDUFB5O43674 189 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.68
SIN3A-201ENST00000360439 MFAP3LO75121 409 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 ATP1A3P13637 1013 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 TM4SF1P30408 202 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 COPB1P53618 953 aaKnown RBP10.77□□□□□ -0.68
SIN3A-201ENST00000360439 CDC42EP5Q6NZY7 148 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 EEPD1Q7L9B9 569 aa10.77□□□□□ -0.68
SIN3A-201ENST00000360439 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.68
SIN3A-201ENST00000360439 ATICP31939 592 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 PLA2G4AP47712 749 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 PDE6CP51160 858 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 RBL2Q08999 1139 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 IFFO1Q0D2I5 559 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 ZNF658Q5TYW1 1059 aaPredicted RBP10.77□□□□□ -0.69
SIN3A-201ENST00000360439 LRRC31Q6UY01 552 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 EPC1Q9H2F5 836 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 PPANQ9NQ55 473 aaKnown RBP10.77□□□□□ -0.69
SIN3A-201ENST00000360439 ZSWIM5Q9P217 1185 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 ATRNO75882 1429 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 IMPDH2P12268 514 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 INAQ16352 499 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 RUBCNQ92622 972 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 IWS1Q96ST2 819 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 DKK3Q9UBP4 350 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 BLOC1S6Q9UL45 172 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 DIS3Q9Y2L1 958 aaKnown RBP10.77□□□□□ -0.69
SIN3A-201ENST00000360439 LMO7Q8WWI1 1683 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 GOLGA8KD6RF30 607 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 FERP16591 822 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 SHC4Q6S5L8 630 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 KRT25Q7Z3Z0 450 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 NAP1L3Q99457 506 aaPredicted RBP10.77□□□□□ -0.69
SIN3A-201ENST00000360439 DESI2Q9BSY9 194 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
SIN3A-201ENST00000360439 LY9Q9HBG7 655 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 TAB2Q9NYJ8 693 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 NOP53Q9NZM5 478 aaKnown RBP10.77□□□□□ -0.69
SIN3A-201ENST00000360439 ITIH6Q6UXX5 1313 aa10.77□□□□□ -0.69
SIN3A-201ENST00000360439 RGPD8O14715 1765 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 TSPAN9O75954 239 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 FAM200BP0CF97 657 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 SNAP25P60880 206 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 UBXN2AP68543 259 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 PPFIA1Q13136 1202 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 DNAJC14Q6Y2X3 702 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 TAOK1Q7L7X3 1001 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 MFN1Q8IWA4 741 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 CASP10Q92851 521 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 SELENOOQ9BVL4 669 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 FDPSP14324 419 aaKnown RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 H2AFXP16104 143 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 HMGCS2P54868 508 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 ASPRV1Q53RT3 343 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 C1QTNF12Q5T7M4 302 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 NCAPH2Q6IBW4 605 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 ARFGAP2Q8N6H7 521 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 THAP9Q9H5L6 903 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 SCOCQ9UIL1 159 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 RPN1P04843 607 aaKnown RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 APBA1Q02410 837 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 TBC1D8BQ0IIM8 1120 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 VWA3BQ502W6 1294 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 TBC1D10CQ8IV04 446 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 SIKE1Q9BRV8 207 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 UBE2Q2LH0YL09 131 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 MYZAPP0CAP1 466 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 GBP1P32455 592 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 MLH1P40692 756 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 ARL6IP4Q66PJ3 421 aaKnown RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 CCDC84Q86UT8 332 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 PRMT6Q96LA8 375 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 BRD8Q9H0E9 1235 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 HERC5Q9UII4 1024 aaKnown RBP10.76□□□□□ -0.69
SIN3A-201ENST00000360439 RABGAP1Q9Y3P9 1069 aa10.76□□□□□ -0.69
SIN3A-201ENST00000360439 MRC1P22897 1456 aa10.75□□□□□ -0.69
SIN3A-201ENST00000360439 TNNC1P63316 161 aa10.75□□□□□ -0.69
SIN3A-201ENST00000360439 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
SIN3A-201ENST00000360439 TAF1CQ15572 869 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms