RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ASTN1O14525 1302 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 MTIF2P46199 727 aaKnown RBP13.98□□□□□ -0.17
GGPS1-202ENST00000358966 RINT1Q6NUQ1 792 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 TOGARAM2Q6ZUX3 1019 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 MYOCDQ8IZQ8 938 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
GGPS1-202ENST00000358966 CTAGE1Q96RT6 745 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 TEX13BQ9BXU2 312 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 ADAMTS5Q9UNA0 930 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 UBIAD1Q9Y5Z9 338 aa13.98□□□□□ -0.17
GGPS1-202ENST00000358966 LRRC10BA6NIK2 292 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 RGS20O76081 388 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-202ENST00000358966 CCDC65Q8IXS2 484 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 GUF1Q8N442 669 aaKnown RBP13.97□□□□□ -0.17
GGPS1-202ENST00000358966 THAP9Q9H5L6 903 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-202ENST00000358966 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 CCNE2O96020 404 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 NR3C2P08235 984 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 HOXD13P35453 343 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 ZC2HC1CQ53FD0 456 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-202ENST00000358966 MIIPQ5JXC2 388 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 B3GNT9Q6UX72 402 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 LRRC55Q6ZSA7 311 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 MIER3Q7Z3K6 550 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-202ENST00000358966 POLR3CQ9BUI4 534 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-202ENST00000358966 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
GGPS1-202ENST00000358966 PAPPA2Q9BXP8 1791 aa13.96□□□□□ -0.17
GGPS1-202ENST00000358966 BICDL2A1A5D9 508 aa13.96□□□□□ -0.17
GGPS1-202ENST00000358966 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
GGPS1-202ENST00000358966 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
GGPS1-202ENST00000358966 FBXO38Q6PIJ6 1188 aa13.96□□□□□ -0.17
GGPS1-202ENST00000358966 GOLGA6L1Q8N7Z2 621 aa13.96□□□□□ -0.17
GGPS1-202ENST00000358966 CCDC112Q8NEF3 446 aa13.96□□□□□ -0.17
GGPS1-202ENST00000358966 TAF1DQ9H5J8 278 aaPredicted RBP13.96□□□□□ -0.17
GGPS1-202ENST00000358966 LCTP09848 1927 aa13.96□□□□□ -0.17
GGPS1-202ENST00000358966 LGALS16A8MUM7 142 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 EYA4O95677 639 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 IREB2P48200 963 aaKnown RBP13.96□□□□□ -0.18
GGPS1-202ENST00000358966 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 PPFIBP1Q86W92 1011 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 OPTNQ96CV9 577 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 PPP1R13BQ96KQ4 1090 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.18
GGPS1-202ENST00000358966 TXNRD2Q9NNW7 524 aa13.96□□□□□ -0.18
GGPS1-202ENST00000358966 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.96□□□□□ -0.18
GGPS1-202ENST00000358966 V9GYY5 206 aaPredicted RBP13.96□□□□□ -0.18
GGPS1-202ENST00000358966 CCDC189A1A4V9 331 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 GLTPD2A6NH11 291 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 AKR1B15C9JRZ8 316 aaPredicted RBP13.95□□□□□ -0.18
GGPS1-202ENST00000358966 GCNT3O95395 438 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 GJA5P36382 358 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 APBA1Q02410 837 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 SPAG1Q07617 926 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 EEPD1Q7L9B9 569 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 TXLNBQ8N3L3 684 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 MB21D1Q8N884 522 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 ZNF507Q8TCN5 953 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 MRPL44Q9H9J2 332 aaKnown RBP13.95□□□□□ -0.18
GGPS1-202ENST00000358966 FRMD3A2A2Y4 597 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 EPHB6O15197 1021 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 KIF1CO43896 1103 aaKnown RBP13.95□□□□□ -0.18
GGPS1-202ENST00000358966 MFAP3LO75121 409 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 NCAPG2Q86XI2 1143 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
GGPS1-202ENST00000358966 DEF6Q9H4E7 631 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 AGPAT5Q9NUQ2 364 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 HOXC10Q9NYD6 342 aa13.95□□□□□ -0.18
GGPS1-202ENST00000358966 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 RASSF10A6NK89 507 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 TBCAO75347 108 aaKnown RBP13.94□□□□□ -0.18
GGPS1-202ENST00000358966 EEF1GP26641 437 aaKnown RBP13.94□□□□□ -0.18
GGPS1-202ENST00000358966 GHRHRQ02643 423 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 SH3D19Q5HYK7 790 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 C1orf186Q6ZWK4 172 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 PACS2Q86VP3 889 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 SMCR8Q8TEV9 937 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-202ENST00000358966 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 ASCC2Q9H1I8 757 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-202ENST00000358966 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 MYH11P35749 1972 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 FRMPD4Q14CM0 1322 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 CLIC2O15247 247 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 NPEPPSP55786 919 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 SOX10P56693 466 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 TBC1D8BQ0IIM8 1120 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 EPHA7Q15375 998 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 RAD9BQ6WBX8 426 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 ANKRD13AQ8IZ07 590 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
GGPS1-202ENST00000358966 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-202ENST00000358966 PCMTD1Q96MG8 357 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms