RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 GIMAP8Q8ND71 665 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GOLPH3LQ9H4A5 285 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GON4LQ3T8J9 2241 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GPC5P78333 572 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 RASA3Q14644 834 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SAMD3Q8N6K7 520 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ZKSCAN4Q969J2 545 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 NSL1Q96IY1 281 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 DESI2Q9BSY9 194 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 KIFC3Q9BVG8 833 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PDS5AQ29RF7 1337 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 CCNT1O60563 726 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FKBP6O75344 327 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PTK2Q05397 1052 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PDCLQ13371 301 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FAM173BQ6P4H8 233 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FRMPD1Q5SYB0 1578 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ADSLP30566 484 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 NUP107P57740 925 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FAM83BQ5T0W9 1011 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ADSSL1Q8N142 457 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TRIM9Q9C026 710 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GDF3Q9NR23 364 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TLDC2A0PJX2 215 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PDE8BO95263 885 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 MSH2P43246 934 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 STRBPQ96SI9 672 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 DBNDD2Q9BQY9 259 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FETUBQ9UGM5 382 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 LRRIQ3A6PVS8 624 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TM9SF1O15321 606 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 RARGP13631 454 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 RASSF7Q02833 373 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 HERC4Q5GLZ8 1057 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 RNPEPL1Q9HAU8 725 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SALL1Q9NSC2 1324 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PDXKO00764 312 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SCTRP47872 440 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 STX17P56962 302 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PPARAQ07869 468 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 KRT24Q2M2I5 525 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 KLHL38Q2WGJ6 581 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ZSCAN29Q8IWY8 852 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SLC30A5Q8TAD4 765 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PPP1R2P1Q96PQ5 205 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 NOD2Q9HC29 1040 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TRPC6Q9Y210 931 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 IRS4O14654 1257 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 LCA5LO95447 670 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SGSM1Q2NKQ1 1148 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 DDX20Q9UHI6 824 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ACBD5Q5T8D3 534 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CYB5RLQ6IPT4 315 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF589Q86UQ0 364 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MAK16Q9BXY0 300 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 AP4S1Q9Y587 144 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MBD4O95243 580 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 GNPTABQ3T906 1256 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CENPPQ6IPU0 288 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 RCOR2Q8IZ40 523 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 STK32AQ8WU08 396 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SCFD1Q8WVM8 642 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 STK33Q9BYT3 514 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SEPT11Q9NVA2 429 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CLTCL1P53675 1640 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 RBAK-RBAKDNI3L0D1 243 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PDE6AP16499 860 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PEX5P50542 639 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 PTENP60484 403 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 IGBP1P78318 339 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ATP2B2Q01814 1243 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 DNAJC3Q13217 504 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 BIRC2Q13490 618 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 HEATR3Q7Z4Q2 680 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SMCR8Q8TEV9 937 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ELAC2Q9BQ52 826 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ECT2Q9H8V3 914 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 AREL1O15033 823 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MYCNP04198 464 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 NUDT17P0C025 328 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CRLF3Q8IUI8 442 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC127Q96BQ5 260 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CNOT6LQ96LI5 555 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TLR7Q9NYK1 1049 aaKnown RBP4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SCINQ9Y6U3 715 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 FAM47DPA6NHR8 397 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 USP27XA6NNY8 438 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 RGS2P41220 211 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 NDUFA5Q16718 116 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TCEANC2Q96MN5 208 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 MCM8Q9UJA3 840 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 ADGRB2O60241 1585 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CNTFP26441 200 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 INF2Q27J81 1249 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SLC45A4Q5BKX6 768 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 KRT27Q7Z3Y8 459 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM126BQ8IUX1 230 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 SLC4A7Q9Y6M7 1214 aa4.42□□□□□ -1.7
SYNE2-204ENST00000358025 CPDO75976 1380 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms