RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 COL22A1Q8NFW1 1626 aaPredicted RBP10.86□□□□□ -0.67
RNF40-202ENST00000357890 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 SLC1A4P43007 532 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 AMPD2Q01433 879 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 IFI16Q16666 785 aaKnown RBP10.86□□□□□ -0.67
RNF40-202ENST00000357890 RASIP1Q5U651 963 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 KDM7AQ6ZMT4 941 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 WHAMMQ8TF30 809 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 AENQ8WTP8 325 aaKnown RBP10.86□□□□□ -0.67
RNF40-202ENST00000357890 SPZ1Q9BXG8 430 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 hCG_2014768A0A024R1R8 64 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 MTMR3Q13615 1198 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 SETDB1Q15047 1291 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 NAALADL2Q58DX5 795 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 FAM196AQ6ZSG2 479 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 FAM47EQ6ZV65 393 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 PEX26Q7Z412 305 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 LONP2Q86WA8 852 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 TBC1D22AQ8WUA7 517 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 GOLPH3Q9H4A6 298 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 STK17AQ9UEE5 414 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 TSKSQ9UJT2 592 aa10.86□□□□□ -0.67
RNF40-202ENST00000357890 LGR5O75473 907 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 LUC7L3O95232 432 aaKnown RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 ADAM9Q13443 819 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 NEDD1Q8NHV4 660 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 GDAP1Q8TB36 358 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 CHMP6Q96FZ7 201 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 ZMYND12Q9H0C1 365 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 KIAA1024Q9UPX6 916 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 TRPC6Q9Y210 931 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 CNTNAP4Q9C0A0 1308 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 HLA-DOAP06340 250 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 RASA1P20936 1047 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 PLTPP55058 493 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 RWDD2BP57060 319 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 UBE2SQ16763 222 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 ANKRD20A8PQ5CZ79 823 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 FBXO41Q8TF61 875 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 DDX23Q9BUQ8 820 aaKnown RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 ATP6V0A4Q9HBG4 840 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 PAPPAQ13219 1627 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 TDP2O95551 362 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 ATP6V1G2O95670 118 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 RXRBP28702 533 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 ZNF131P52739 623 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 LRRC23Q53EV4 343 aaPredicted RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 HAUS3Q68CZ6 603 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 RBM17Q96I25 401 aaKnown RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 DUSP9Q99956 384 aaKnown RBP10.85□□□□□ -0.67
RNF40-202ENST00000357890 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 SH2D4AQ9H788 454 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 PLAGL2Q9UPG8 496 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
RNF40-202ENST00000357890 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 TBCAO75347 108 aaKnown RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 RC3H1Q5TC82 1133 aaKnown RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 UNC13DQ70J99 1090 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 CEP120Q8N960 986 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ANKS1AQ92625 1134 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 VCXQ9H320 206 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ARHGAP20Q9P2F6 1191 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 MYH3P11055 1940 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 MYMKA6NI61 221 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 hCG_1984214I3L0E3 225 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 SHOX2O60902 331 aaPredicted RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 SLC16A2P36021 539 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ERFP50548 548 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 PPP4CP60510 307 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 DRP2Q13474 957 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 NUGGCQ68CJ6 796 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ZNF713Q8N859 430 aaPredicted RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 C4orf32Q8N8J7 132 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 RAPGEF5Q92565 580 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 GJA10Q969M2 543 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 GBP5Q96PP8 586 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 PSMD1Q99460 953 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ECT2Q9H8V3 914 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 GRIN2DO15399 1336 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ZNF233A6NK53 670 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 USP17L5A8MUK1 530 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 DAPK3O43293 454 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 DDR1Q08345 913 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 ZNF449Q6P9G9 518 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 MMGT1Q8N4V1 131 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms