RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 LETM2Q2VYF4 491 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 GALNTL6Q49A17 601 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 CCDC26Q8TAB7 109 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 ACSBG1Q96GR2 724 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 BAIAP2L1Q9UHR4 511 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 AGAP1Q9UPQ3 857 aa13.21□□□□□ -0.3
SMARCAL1-201ENST00000357276 ROBO3Q96MS0 1386 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 ATP2C2O75185 946 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 ANXA13P27216 316 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 PRKCIP41743 596 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 NPEPPSP55786 919 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 ICA1Q05084 483 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 NAIF1Q69YI7 327 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 TRPM8Q7Z2W7 1104 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 KIRREL3Q8IZU9 778 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 NAGPAQ9UK23 515 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 PCDHA2Q9Y5H9 948 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 LY75O60449 1722 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 EDIL3O43854 480 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 GYG1P46976 350 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 CCNG1P51959 295 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 PPARDQ03181 441 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 MYO1EQ12965 1108 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 NAA25Q14CX7 972 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 HOOK3Q86VS8 718 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 MYOCDQ8IZQ8 938 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 DDX12PQ92771 950 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 ZNF570Q96NI8 536 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-201ENST00000357276 BTAF1O14981 1849 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 MMEP08473 750 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 INHBEP58166 350 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 PDIA5Q14554 519 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 SEPT2Q15019 361 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 DUPD1Q68J44 220 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 SPZ1Q9BXG8 430 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 FRMD3A2A2Y4 597 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 LIN7AO14910 233 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 SHBGP04278 402 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 KLRC3Q07444 240 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 LRRC41Q15345 812 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 LRRC34Q8IZ02 419 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 TMEM109Q9BVC6 243 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 PABPC3Q9H361 631 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 SMNDC1O75940 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 RARAP10276 462 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 KCNK18Q7Z418 384 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 LMBR1Q8WVP7 490 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 FMO2Q99518 471 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 CELF4Q9BZC1 486 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 SLC5A4Q9NY91 659 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 INTUQ9ULD6 942 aa13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 UTP11Q9Y3A2 253 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-201ENST00000357276 NQO1P15559 274 aaKnown RBP13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 PTENP60484 403 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 NCALDP61601 193 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 COASYQ13057 564 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 UBE4AQ14139 1066 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 USP21Q9UK80 565 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 L3MBTL1Q9Y468 752 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 HSPA1LP34931 641 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 TFAP4Q01664 338 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 MECOMQ03112 1051 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCAL1-201ENST00000357276 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-201ENST00000357276 TRAF5O00463 557 aa13.17□□□□□ -0.3
SMARCAL1-201ENST00000357276 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms