RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 PAFAH1B1P43034 410 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 ZYXQ15942 572 aaKnown RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 NAA35Q5VZE5 725 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 CDAN1Q8IWY9 1227 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 MSL3Q8N5Y2 521 aaKnown RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 FAM76AQ8TAV0 307 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 RPGRIP1Q96KN7 1286 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
PTBP1-203ENST00000356948 NEUROG2Q9H2A3 272 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 NR2E1Q9Y466 385 aa16.72■□□□□ 0.27
PTBP1-203ENST00000356948 MYH4Q9Y623 1939 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 PLIN4Q96Q06 1357 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 MSH4O15457 936 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 PSMD2Q13200 908 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 SLF2Q8IX21 1173 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 GIMAP7Q8NHV1 300 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
PTBP1-203ENST00000356948 WRAP73Q9P2S5 460 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-203ENST00000356948 TISP43B9A030 160 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 GNGT1P63211 74 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 PKD2L1Q9P0L9 805 aa16.71■□□□□ 0.27
PTBP1-203ENST00000356948 GRIN2DO15399 1336 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 BACH1O14867 736 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 GCNT3O95395 438 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.26
PTBP1-203ENST00000356948 HOXA10P31260 410 aaPredicted RBP16.71■□□□□ 0.26
PTBP1-203ENST00000356948 PDE6BP35913 854 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.26
PTBP1-203ENST00000356948 ASIC2Q16515 512 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 MEI1Q5TIA1 1274 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.26
PTBP1-203ENST00000356948 NCAPGQ9BPX3 1015 aa16.71■□□□□ 0.26
PTBP1-203ENST00000356948 RBAK-RBAKDNI3L0D1 243 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 ZEB2O60315 1214 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 PPP1R2P41236 205 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 MAGEA9P43362 315 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 GUCY1A3Q02108 690 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.261e-20■□□□□ 8.4
PTBP1-203ENST00000356948 TEKT1Q969V4 418 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 DDX47Q9H0S4 455 aaKnown RBP16.7■□□□□ 0.26
PTBP1-203ENST00000356948 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 RGL2O15211 777 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 NDUFB10O96000 172 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 PALB2Q86YC2 1186 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 SPAG5Q96R06 1193 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 ASTN1O14525 1302 aa16.7■□□□□ 0.26
PTBP1-203ENST00000356948 GFPT2O94808 682 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 GH2P01242 217 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 GPATCH4Q5T3I0 446 aaKnown RBP16.69■□□□□ 0.26
PTBP1-203ENST00000356948 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-203ENST00000356948 CELF4Q9BZC1 486 aaKnown RBP16.69■□□□□ 0.26
PTBP1-203ENST00000356948 TUBBP07437 444 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ICA1Q05084 483 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 SF3A3Q12874 501 aaKnown RBP eCLIP16.69■□□□□ 0.267e-8■■■□□ 19.1
PTBP1-203ENST00000356948 TPH2Q8IWU9 490 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 CETN3O15182 167 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 CEP104O60308 925 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ATP2C2O75185 946 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ERLIN2O94905 339 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 TRIM49P0CI25 452 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 PRLRP16471 622 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 LLGL1Q15334 1064 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 HYIQ5T013 277 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 AADACL2Q6P093 401 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ZNF572Q7Z3I7 529 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ZSWIM2Q8NEG5 633 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 CRYGNQ8WXF5 182 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 SIX2Q9NPC8 291 aa16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-203ENST00000356948 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 TOM1O60784 492 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 HLA-DOAP06340 250 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 ABCB4P21439 1286 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
PTBP1-203ENST00000356948 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 BCAS4Q8TDM0 211 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 IGSF9BQ9UPX0 1349 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 GUCY2CP25092 1073 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 FBXW10Q5XX13 1052 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 CCDC174Q6PII3 467 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 TAS2R14Q9NYV8 317 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 TGFB1I1O43294 461 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 SEC24CP53992 1094 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 NNTQ13423 1086 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 EXOC3L4Q17RC7 722 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms