RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 FMR1NBQ8N0W7 255 aaPredicted RBP4.52□□□□□ -1.69
LIG4-201ENST00000356922 TMEM87AQ8NBN3 555 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 KCNG4Q8TDN1 519 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 SNX29Q8TEQ0 813 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 HPS3Q969F9 1004 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 CDHR1Q96JP9 859 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 IKZF4Q9H2S9 585 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 TUT1Q9H6E5 874 aaKnown RBP4.52□□□□□ -1.69
LIG4-201ENST00000356922 GPRC5CQ9NQ84 441 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 SETD4Q9NVD3 440 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 TCEAL9Q9UHQ7 104 aa4.52□□□□□ -1.69
LIG4-201ENST00000356922 WDR64B1ANS9 1081 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 BACH1O14867 736 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 LGR5O75473 907 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 MYL3P08590 195 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 PRR29P0C7W0 189 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 CMA1P23946 247 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 CCT6AP40227 531 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 GJA8P48165 433 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 NKX3-2P78367 333 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 MDM2Q00987 491 aaPredicted RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 MCM6Q14566 821 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 NFKBIBQ15653 356 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 NBPF20Q3BBV1 942 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 CABP7Q86V35 215 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 GLIS3Q8NEA6 775 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 GLG1Q92896 1179 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 PAWRQ96IZ0 340 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 FGFBP2Q9BYJ0 223 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 HDAC6Q9UBN7 1215 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 SERTAD1Q9UHV2 236 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 USP20Q9Y2K6 914 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 IGSF9BQ9UPX0 1349 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 RSPH10B2B2RC85 870 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 HAS3O00219 553 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 LAD1O00515 517 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 NOP56O00567 594 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 TREHO43280 583 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ACTN4O43707 911 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 CUTAO60888 179 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 CSDE1O75534 798 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 F2P00734 622 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 P4HBP07237 508 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 RSPH10BP0C881 870 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 INSRRP14616 1297 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 LONP1P36776 959 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 QARSP47897 775 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 IGBP1P78318 339 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ADAM17P78536 824 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 KRT76Q01546 638 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 PRKCEQ02156 737 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TARBP2Q15633 366 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 CAMK4Q16566 473 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 DGKDQ16760 1214 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TMEM119Q4V9L6 283 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ATL3Q6DD88 541 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 PDXDC2PQ6P474 469 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 KCNV1Q6PIU1 500 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 KSR1Q8IVT5 923 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TRMT44Q8IYL2 757 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 DAW1Q8N136 415 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 FSIP1Q8NA03 581 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 DHX58Q96C10 678 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 RUSC1Q9BVN2 902 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TRPV6Q9H1D0 765 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 BHMT2Q9H2M3 363 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 CDHR5Q9HBB8 845 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 XPNPEP1Q9NQW7 623 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ZNF302Q9NR11 478 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TRMT13Q9NUP7 481 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 NRBP1Q9UHY1 535 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 KCNH3Q9ULD8 1083 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ATP6V1DQ9Y5K8 247 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 MORC2Q9Y6X9 1032 aaPredicted RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 FRMPD3Q5JV73 1810 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 EVPLQ92817 2033 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TRIOO75962 3097 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 SCN10AQ9Y5Y9 1956 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 FAM237AA0A1B0GTK4 181 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 A0A1W2PQ45 241 aaPredicted RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 A0A1W2PQY0 241 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 B4DLN1 442 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ZNF202O95125 648 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 TFRCP02786 760 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 COL6A1P12109 1028 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ITGB8P26012 769 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 YWHABP31946 246 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 UBA7P41226 1012 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 SLC12A3P55017 1021 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 ORC2Q13416 577 aaPredicted RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 PKN2Q16513 984 aaKnown RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 HYIQ5T013 277 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 GDF6Q6KF10 455 aaPredicted RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 RUFY4Q6ZNE9 571 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 UBE2Q1Q7Z7E8 422 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 LRRC71Q8N4P6 559 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 AFAP1L1Q8TED9 768 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 CCSER1Q9C0I3 900 aa4.51□□□□□ -1.69
LIG4-201ENST00000356922 SENP6Q9GZR1 1112 aaPredicted RBP4.51□□□□□ -1.69
LIG4-201ENST00000356922 BLZF1Q9H2G9 400 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms