RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PPP1R37O75864 691 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 PSMC5P62195 406 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 ALCAMQ13740 583 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 MAN2A1Q16706 1144 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 SFR1Q86XK3 245 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 MYH11P35749 1972 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 DNAJC25-GNG10A0A024R161 153 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 STBD1O95210 358 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 SSBP05455 408 aaKnown RBP eCLIP19.06■□□□□ 0.64
VPS13B-201ENST00000355155 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
VPS13B-201ENST00000355155 E4F1Q66K89 784 aaPredicted RBP19.06■□□□□ 0.64
VPS13B-201ENST00000355155 GADL1Q6ZQY3 521 aa19.06■□□□□ 0.64
VPS13B-201ENST00000355155 TPM2P07951 284 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 ALDH5A1P51649 535 aaPredicted RBP19.05■□□□□ 0.64
VPS13B-201ENST00000355155 SNAPC2Q13487 334 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 MYBPC2Q14324 1141 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 GNPTABQ3T906 1256 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 VPS16Q9H269 839 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 KRT18P05783 430 aaKnown RBP19.05■□□□□ 0.64
VPS13B-201ENST00000355155 MYCLP12524 364 aaPredicted RBP19.05■□□□□ 0.64
VPS13B-201ENST00000355155 RARRES1P49788 294 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 IRX3P78415 501 aaPredicted RBP19.05■□□□□ 0.64
VPS13B-201ENST00000355155 RBL2Q08999 1139 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 VWA3BQ502W6 1294 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 PURBQ96QR8 312 aaKnown RBP19.05■□□□□ 0.64
VPS13B-201ENST00000355155 PARVGQ9HBI0 331 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 TYW1Q9NV66 732 aaKnown RBP19.05■□□□□ 0.64
VPS13B-201ENST00000355155 CAPN11Q9UMQ6 739 aa19.05■□□□□ 0.64
VPS13B-201ENST00000355155 SIP14410 1827 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 CHMP2AO43633 222 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 TBCAO75347 108 aaKnown RBP19.04■□□□□ 0.64
VPS13B-201ENST00000355155 EDEM3Q9BZQ6 932 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 RBPJLQ9UBG7 517 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 SLC16A3O15427 465 aaKnown RBP19.04■□□□□ 0.64
VPS13B-201ENST00000355155 PPP2R3AQ06190 1150 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 STXBP2Q15833 593 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 MOB2Q70IA6 237 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 PPFIBP1Q86W92 1011 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 PIGOQ8TEQ8 1089 aa19.04■□□□□ 0.64
VPS13B-201ENST00000355155 BAG1Q99933 345 aaPredicted RBP19.04■□□□□ 0.64
VPS13B-201ENST00000355155 TRPM7Q96QT4 1865 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 ZMYM2Q9UBW7 1377 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 UBXN1Q04323 297 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 LRRC41Q15345 812 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 DAW1Q8N136 415 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 MROH8Q9H579 483 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 PCDHA10Q9Y5I2 948 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 IGSF9BQ9UPX0 1349 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 IGKV6D-21A0A0A0MT36 114 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 RASSF10A6NK89 507 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 CALUO43852 315 aaPredicted RBP19.03■□□□□ 0.64
VPS13B-201ENST00000355155 CASP5P51878 434 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 SNRPFP62306 86 aaKnown RBP19.03■□□□□ 0.64
VPS13B-201ENST00000355155 ABHD15Q6UXT9 468 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 ZNF720Q7Z2F6 126 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 TRIM59Q8IWR1 403 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 BANK1Q8NDB2 785 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 DNAJC7Q99615 494 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 FAM184BQ9ULE4 1060 aa19.03■□□□□ 0.64
VPS13B-201ENST00000355155 ARHGEF35A5YM69 484 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 RSPH10B2B2RC85 870 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 KIF2AO00139 706 aaPredicted RBP19.02■□□□□ 0.64
VPS13B-201ENST00000355155 RSPH10BP0C881 870 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 CEP135Q66GS9 1140 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 FRMD5Q7Z6J6 570 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 CGNQ9P2M7 1197 aaKnown RBP19.02■□□□□ 0.64
VPS13B-201ENST00000355155 PNMA3Q9UL41 463 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 SIK3Q9Y2K2 1263 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 SOWAHBA6NEL2 793 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 B4DLN1 442 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 FAM13AO94988 1023 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 TGFB3P10600 412 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 STXBP4Q6ZWJ1 553 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 SLC9A9Q8IVB4 645 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 C17orf53Q8N3J3 647 aaPredicted RBP19.02■□□□□ 0.64
VPS13B-201ENST00000355155 ZFP91Q96JP5 570 aaPredicted RBP19.02■□□□□ 0.64
VPS13B-201ENST00000355155 MS4A4AQ96JQ5 239 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 FGD4Q96M96 766 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 PDLIM7Q9NR12 457 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 TCEAL9Q9UHQ7 104 aa19.02■□□□□ 0.64
VPS13B-201ENST00000355155 DOCK5Q9H7D0 1870 aa19.02■□□□□ 0.63
VPS13B-201ENST00000355155 RTP1P59025 263 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 CDK17Q00537 523 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 PADI6Q6TGC4 694 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 C12orf56Q8IXR9 622 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 NOC4LQ9BVI4 516 aaKnown RBP19.01■□□□□ 0.63
VPS13B-201ENST00000355155 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
VPS13B-201ENST00000355155 TPM1P09493 284 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 HNRNPH3P31942 346 aaKnown RBP19.01■□□□□ 0.63
VPS13B-201ENST00000355155 YWHABP31946 246 aaKnown RBP19.01■□□□□ 0.63
VPS13B-201ENST00000355155 MTIF2P46199 727 aaKnown RBP19.01■□□□□ 0.63
VPS13B-201ENST00000355155 FXR1P51114 621 aaKnown RBP eCLIP19.01■□□□□ 0.63
VPS13B-201ENST00000355155 MEA1Q16626 185 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 ANKRD23Q86SG2 305 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 HVCN1Q96D96 273 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 MKNK1Q9BUB5 465 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 NDST4Q9H3R1 872 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 DMAC2Q9NW81 257 aa19.01■□□□□ 0.63
VPS13B-201ENST00000355155 PLXNB2O15031 1838 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms