RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CCDC197Q8NCU1 140 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 RMDN3Q96TC7 470 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 Q9H521 79 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 INPP5FQ9Y2H2 1132 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 POTEMA6NI47 508 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 WDR64B1ANS9 1081 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 NMT2O60551 498 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 EPHA10Q5JZY3 1008 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 TMTC3Q6ZXV5 915 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 DGKHQ86XP1 1220 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 NUDCD1Q96RS6 583 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 POLD4Q9HCU8 107 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 WDR91A4D1P6 747 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 PSMA2P25787 234 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SLC27A3Q5K4L6 730 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 GANCQ8TET4 914 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 GCNAQ96QF7 691 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SLITRK6Q9H5Y7 841 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 GDAQ9Y2T3 454 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ABCB11O95342 1321 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 NDUFA10O95299 355 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SOX5P35711 763 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SLC7A5Q01650 507 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 IFT88Q13099 833 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ALCAMQ13740 583 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
SCN8A-202ENST00000355133 EFCAB13Q8IY85 973 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SCYL3Q8IZE3 742 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 CDC26Q8NHZ8 85 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ALKBH8Q96BT7 664 aaKnown RBP14.23□□□□□ -0.13
SCN8A-202ENST00000355133 WRNIP1Q96S55 665 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ZBED1O96006 694 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 JAK3P52333 1124 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 KRT31Q15323 416 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ARL13BQ3SXY8 428 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 CLEC4GQ6UXB4 293 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 TMEM47Q9BQJ4 181 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 SH3GLB2Q9NR46 395 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 MINPP1Q9UNW1 487 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.23□□□□□ -0.13
SCN8A-202ENST00000355133 GNGT2O14610 69 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ZBTB5O15062 677 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 LRRC63Q05C16 580 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ARL6IP4Q66PJ3 421 aaKnown RBP14.23□□□□□ -0.13
SCN8A-202ENST00000355133 TCP11Q8WWU5 503 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 ZBED2Q9BTP6 218 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 FAN1Q9Y2M0 1017 aa14.23□□□□□ -0.13
SCN8A-202ENST00000355133 STXBP2Q15833 593 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 SNRNP48Q6IEG0 339 aaKnown RBP14.22□□□□□ -0.13
SCN8A-202ENST00000355133 ATP6V0A4Q9HBG4 840 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 NGRNQ9NPE2 291 aaKnown RBP14.22□□□□□ -0.13
SCN8A-202ENST00000355133 CYP27B1O15528 508 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 CYP2E1P05181 493 aaPredicted RBP14.22□□□□□ -0.13
SCN8A-202ENST00000355133 DR1Q01658 176 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 TRIM42Q8IWZ5 723 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 SLC44A5Q8NCS7 719 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 MGEA5O60502 916 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 C2orf69Q8N8R5 385 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 GINM1Q9NU53 330 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 ADAMTS1Q9UHI8 967 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 USP17L10C9JJH3 530 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 PLS3P13797 630 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 PMLP29590 882 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 HP1BP3Q5SSJ5 553 aaPredicted RBP14.22□□□□□ -0.13
SCN8A-202ENST00000355133 TBC1D9BQ66K14 1250 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 EXT2Q93063 718 aa14.22□□□□□ -0.13
SCN8A-202ENST00000355133 PPWD1Q96BP3 646 aaKnown RBP14.22□□□□□ -0.13
SCN8A-202ENST00000355133 OLA1Q9NTK5 396 aaKnown RBP14.22□□□□□ -0.13
SCN8A-202ENST00000355133 EXOC1LA0A1B0GW35 172 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 ATP1A3P13637 1013 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 PPP6R3Q5H9R7 873 aaPredicted RBP14.21□□□□□ -0.13
SCN8A-202ENST00000355133 CYB5R4Q7L1T6 521 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 FGD4Q96M96 766 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 GOLGA8QA0A0J9YX86 632 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 GOLGA8OA6NCC3 632 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 GOLGA8NF8WBI6 632 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 CASP1P29466 404 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 PRELPP51888 382 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 BRINP3Q76B58 766 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 GSTA4O15217 222 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 ALKBH5Q6P6C2 394 aaKnown RBP14.21□□□□□ -0.13
SCN8A-202ENST00000355133 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
SCN8A-202ENST00000355133 SFR1Q86XK3 245 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms