RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 TTC31Q49AM3 519 aaPredicted RBP12.21□□□□□ -0.45
NEIL1-201ENST00000355059 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 VPS36Q86VN1 386 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 KLHL7Q8IXQ5 586 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 CPA4Q9UI42 421 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 PNMA3Q9UL41 463 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 RRP15Q9Y3B9 282 aaKnown RBP12.21□□□□□ -0.45
NEIL1-201ENST00000355059 MYH2Q9UKX2 1941 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 C19orf81C9J6K1 198 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 N4BP1O75113 896 aaKnown RBP12.21□□□□□ -0.45
NEIL1-201ENST00000355059 SLC7A5Q01650 507 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 IFFO1Q0D2I5 559 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 DCAF17Q5H9S7 520 aaPredicted RBP12.21□□□□□ -0.45
NEIL1-201ENST00000355059 TAX1BP1Q86VP1 789 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 HPS3Q969F9 1004 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 PNKPQ96T60 521 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 NAP1L4Q99733 375 aaKnown RBP12.21□□□□□ -0.45
NEIL1-201ENST00000355059 ACAD9Q9H845 621 aa12.21□□□□□ -0.45
NEIL1-201ENST00000355059 LGALS16A8MUM7 142 aa12.21□□□□□ -0.46
NEIL1-201ENST00000355059 ATP1A1P05023 1023 aaKnown RBP12.21□□□□□ -0.46
NEIL1-201ENST00000355059 MTMR1Q13613 665 aa12.21□□□□□ -0.46
NEIL1-201ENST00000355059 FKBP1CQ5VVH2 108 aa12.21□□□□□ -0.46
NEIL1-201ENST00000355059 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.46
NEIL1-201ENST00000355059 P2RX7Q99572 595 aaKnown RBP12.21□□□□□ -0.46
NEIL1-201ENST00000355059 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.46
NEIL1-201ENST00000355059 CCDC113Q9H0I3 377 aa12.21□□□□□ -0.46
NEIL1-201ENST00000355059 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.46
NEIL1-201ENST00000355059 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 E9PMD0 336 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 ERLIN2O94905 339 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 GCNT3O95395 438 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 MOCS3O95396 460 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 CYP2B6P20813 491 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 HPDP32754 393 aaPredicted RBP12.2□□□□□ -0.46
NEIL1-201ENST00000355059 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
NEIL1-201ENST00000355059 USP8P40818 1118 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 GUCY2FP51841 1108 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 TRIM58Q8NG06 486 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 FUT8Q9BYC5 575 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 BHMT2Q9H2M3 363 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 MED4Q9NPJ6 270 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 SH3GLB2Q9NR46 395 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 ATP1A2P50993 1020 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 ERVK-24P63145 666 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 FASTKD5Q7L8L6 764 aaKnown RBP12.2□□□□□ -0.46
NEIL1-201ENST00000355059 CCDC65Q8IXS2 484 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 NDUFAB1O14561 156 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 CCNE1P24864 410 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 SLC9C1Q4G0N8 1177 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 ZFYVE27Q5T4F4 411 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 FAM102BQ5T8I3 360 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 KCTD16Q68DU8 428 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
NEIL1-201ENST00000355059 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 SLC37A4O43826 429 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 MNAT1P51948 309 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 ARL6IP4Q66PJ3 421 aaKnown RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 RPGRIP1Q96KN7 1286 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 AGPAT5Q9NUQ2 364 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 SEPT9Q9UHD8 586 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 COL4A1P02462 1669 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 PPP1R2P41236 205 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 PRELPP51888 382 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 ZBED6P86452 979 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 TBX2Q13207 712 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 TATDN1Q6P1N9 297 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 SLFN12Q8IYM2 578 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 RIN2Q8WYP3 895 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 HSD3B7Q9H2F3 369 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 RIOX1Q9H6W3 641 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 PPP1R9AQ9ULJ8 1098 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 hCG_1984214I3L0E3 225 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 IPO5O00410 1097 aaKnown RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 ZNF185O15231 689 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 MDM2Q00987 491 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 MTERF2Q49AM1 385 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 DNAJC14Q6Y2X3 702 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 ZNF713Q8N859 430 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 MMS19Q96T76 1030 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 MMP19Q99542 508 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 LIMA1Q9UHB6 759 aaKnown RBP12.19□□□□□ -0.46
NEIL1-201ENST00000355059 CHD4Q14839 1912 aa12.19□□□□□ -0.46
NEIL1-201ENST00000355059 FCER1AP12319 257 aa12.18□□□□□ -0.46
NEIL1-201ENST00000355059 SARSP49591 514 aaKnown RBP12.18□□□□□ -0.46
NEIL1-201ENST00000355059 GNGT1P63211 74 aa12.18□□□□□ -0.46
NEIL1-201ENST00000355059 KLHL30Q0D2K2 578 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms