RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 ABL1P00519 1130 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 PFKMP08237 780 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 BMP7P18075 431 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 COL9A3Q14050 684 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-201ENST00000354268 PCBP2Q15366 365 aaKnown RBP eCLIP2.53□□□□□ -2
SMARCAD1-201ENST00000354268 MEA1Q16626 185 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 ARL13BQ3SXY8 428 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 CCDC149Q6ZUS6 474 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 UBALD2Q8IYN6 164 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 PPM1EQ8WY54 764 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 CENPIQ92674 756 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-201ENST00000354268 PARK7Q99497 189 aaKnown RBP2.53□□□□□ -2
SMARCAD1-201ENST00000354268 APOL6Q9BWW8 343 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 TMEM60Q9H2L4 133 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 ZDHHC7Q9NXF8 308 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 POLHQ9Y253 713 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 RTCBQ9Y3I0 505 aaKnown RBP2.53□□□□□ -2
SMARCAD1-201ENST00000354268 RAPGEF2Q9Y4G8 1499 aa2.53□□□□□ -2
SMARCAD1-201ENST00000354268 USP42Q9H9J4 1324 aaKnown RBP2.53□□□□□ -2.01
SMARCAD1-201ENST00000354268 OVOS2A0A0J9YW53 1432 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 OVOS2Q6IE36 1432 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 POLA1P09884 1462 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 C9J4A7 227 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ARVCFO00192 962 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ARIH2O95376 493 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 EPS15P42566 896 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SF3B4Q15427 424 aaKnown RBP eCLIP2.52□□□□□ -2.011e-6■■■■■ 44.9
SMARCAD1-201ENST00000354268 GRIK5Q16478 980 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 GRAMD1BQ3KR37 738 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZC3H12BQ5HYM0 836 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 HHIPL1Q96JK4 782 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 C1orf74Q96LT6 269 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 NECTIN4Q96NY8 510 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 GCNAQ96QF7 691 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 JMJD8Q96S16 334 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZNF576Q9H609 170 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 PLCB1Q9NQ66 1216 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SMG5Q9UPR3 1016 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ALG6Q9Y672 507 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 RNF123Q5XPI4 1314 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 NWD1Q149M9 1564 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ERVK-7P63135 1459 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 A0A0U1RQG5 324 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SLC27A2O14975 620 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 POLR2DO15514 142 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 LAMTOR5O43504 91 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SYPP08247 313 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SUPT20HL2P0C7V6 817 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 EIF4BP23588 611 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 MPP2Q14168 576 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SSPNQ14714 243 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 DBN1Q16643 649 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 KLHDC10Q6PID8 442 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ATG14Q6ZNE5 492 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 LYSMD3Q7Z3D4 306 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 APOBEC3FQ8IUX4 373 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 TTC5Q8N0Z6 440 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ATG16L2Q8NAA4 619 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 COG1Q8WTW3 980 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 DHRS4Q9BTZ2 278 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 PUS7LQ9H0K6 701 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 TAOK3Q9H2K8 898 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 CNNM2Q9H8M5 875 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 FAM13BQ9NYF5 915 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SPG7Q9UQ90 795 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 MAGI3Q5TCQ9 1506 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 A0A0A6YYC8 382 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 I3L1I5 382 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 MYO1FO00160 1098 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 POLRMTO00411 1230 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 MAN1A2O60476 641 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 TMEM63AO94886 807 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 TRIM37O94972 964 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 APBB3O95704 486 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ITGAVP06756 1048 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 CHRNB4P30926 498 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 CNR2P34972 360 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 DSC2Q02487 901 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 PTK2Q05397 1052 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 RNF219Q5W0B1 726 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 HAUS3Q68CZ6 603 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 DPY19L2P1Q6NXN4 242 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZNF790Q6PG37 636 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 IL17DQ8TAD2 202 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 RIN3Q8TB24 985 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ELAC2Q9BQ52 826 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 CCDC77Q9BR77 488 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 PRKRIP1Q9H875 184 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 CBX8Q9HC52 389 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 LMBRD1Q9NUN5 540 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ABI2Q9NYB9 513 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 TPCN1Q9ULQ1 816 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 PCDHB2Q9Y5E7 798 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SOGA1O94964 1423 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 SPATA31C2B4DYI2 1134 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 FUCA1P04066 466 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 NR2F1P10589 423 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 ACPPP15309 386 aa2.52□□□□□ -2.01
SMARCAD1-201ENST00000354268 TATP17735 454 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms