RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SGCZQ96LD1 299 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 AIFM3Q96NN9 605 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SP110Q9HB58 689 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 NGRNQ9NPE2 291 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 MARCH2Q9P0N8 246 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 RGS17Q9UGC6 210 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 RCAN3Q9UKA8 241 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SF3B6Q9Y3B4 125 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SIT1Q9Y3P8 196 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 NOC2LQ9Y3T9 749 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 RWDD3Q9Y3V2 267 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SHANK3Q9BYB0 1731 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 WTIPA6NIX2 430 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PQBP1O60828 265 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 POU2F2P09086 479 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CHKAP35790 457 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 GALK1P51570 392 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SESN3P58005 492 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CDK17Q00537 523 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ALDH6A1Q02252 535 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ATAT1Q5SQI0 421 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 IGF2-ASQ6U949 168 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TOGARAM2Q6ZUX3 1019 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF765Q7L2R6 523 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CHST15Q7LFX5 561 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 OTOP1Q7RTM1 612 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ANKLE2Q86XL3 938 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 LYSMD2Q8IV50 215 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SLC41A1Q8IVJ1 513 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ARMT1Q9H993 441 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CEP350Q5VT06 3117 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 FAM170BA6NMN3 283 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 BMP3P12645 472 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 AGXTP21549 392 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 USP11P51784 963 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 KIZQ2M2Z5 673 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC184Q52MB2 194 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CATSPEREQ5SY80 951 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CWF19L1Q69YN2 538 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 CEP68Q76N32 757 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ENAHQ8N8S7 591 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 KCT2Q8NC54 265 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TSPEARQ8WU66 669 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 HPS3Q969F9 1004 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SCARF2Q96GP6 870 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ZDHHC5Q9C0B5 715 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 GPRC5BQ9NZH0 403 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 RBPJLQ9UBG7 517 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 TCFL5Q9UL49 500 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SRPK3Q9UPE1 567 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SPO11Q9Y5K1 396 aa2.05□□□□□ -2.08
BRCA1-202ENST00000354071 SETD1BQ9UPS6 1966 aaKnown RBP2.05□□□□□ -2.08
BRCA1-202ENST00000354071 ABCC10Q5T3U5 1492 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 DYTNA2CJ06 578 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 LRRC10BA6NIK2 292 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 TRIM75PA6NK02 468 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 FAM90A27PA6NNH2 459 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 ULK1O75385 1050 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 TBC1D8O95759 1140 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PEX2P28328 305 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CD96P40200 585 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 IREB2P48200 963 aaKnown RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 IL10RAQ13651 578 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 KLHDC7AQ5VTJ3 777 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 GPR155Q7Z3F1 870 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 KCNK18Q7Z418 384 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 RASSF3Q86WH2 238 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 KIF18BQ86Y91 864 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 AMOTL1Q8IY63 956 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 FAM186BQ8IYM0 893 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 OR2I1PQ8NGU4 316 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 KAT5Q92993 513 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 C18orf8Q96DM3 657 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC140Q96MF4 163 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 BOCQ9BWV1 1114 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 NLRC4Q9NPP4 1024 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CASS4Q9NQ75 786 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 DPP7Q9UHL4 492 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 MRFAP1Q9Y605 127 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 ANO9A1A5B4 782 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 F8W8V4 182 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 H3BS24 57 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 DDX3XO00571 662 aaKnown RBP eCLIP2.04□□□□□ -2.081e-8■■■□□ 17.6
BRCA1-202ENST00000354071 WNT9AO14904 365 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 FGF10O15520 208 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 ADAM23O75077 832 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 OFD1O75665 1012 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 APOL3O95236 402 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 MTNR1BP49286 362 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 HSP90AB4PQ58FF6 505 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 WDR78Q5VTH9 848 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 NPNTQ6UXI9 565 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 KRTAP19-1Q8IUB9 90 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 IFNL2Q8IZJ0 200 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CLASRPQ8N2M8 674 aaKnown RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 TMEM151AQ8N4L1 468 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 FBXL6Q8N531 539 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 SCYL1Q96KG9 808 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms