RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 GRM4Q14833 912 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 DZIP1Q86YF9 867 aaKnown RBP16.3■□□□□ 0.2
TRAF3-202ENST00000351691 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 ATXN2LQ8WWM7 1075 aaKnown RBP16.3■□□□□ 0.2
TRAF3-202ENST00000351691 PGM2Q96G03 612 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 NEUROG2Q9H2A3 272 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 PCDHA4Q9UN74 947 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
TRAF3-202ENST00000351691 PGRMC1O00264 195 aaKnown RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 ONECUT3O60422 494 aaPredicted RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 SKAP2O75563 359 aaPredicted RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 ASIC1P78348 528 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 GBP7Q8N8V2 638 aaPredicted RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 WFS1O76024 890 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 LDHCP07864 332 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 NUDT17P0C025 328 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 CYP2D6P10635 497 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 PECAM1P16284 738 aaPredicted RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 PRDX5P30044 214 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 PPP4CP60510 307 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
TRAF3-202ENST00000351691 RASGEF1CQ8N431 466 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 MCM9Q9NXL9 1143 aa16.29■□□□□ 0.2
TRAF3-202ENST00000351691 PVALEFA0A1B0GWK0 134 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 M0R2N6 131 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 PLCG1P19174 1290 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 TM4SF1P30408 202 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 C15orf52Q6ZUT6 534 aaKnown RBP16.28■□□□□ 0.2
TRAF3-202ENST00000351691 TBC1D1Q86TI0 1168 aaPredicted RBP16.28■□□□□ 0.2
TRAF3-202ENST00000351691 CABP7Q86V35 215 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 GUF1Q8N442 669 aaKnown RBP16.28■□□□□ 0.2
TRAF3-202ENST00000351691 KIAA0895Q8NCT3 520 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 LRRC15Q8TF66 581 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 PANK4Q9NVE7 773 aa16.28■□□□□ 0.2
TRAF3-202ENST00000351691 EME2A4GXA9 379 aaPredicted RBP16.27■□□□□ 0.2
TRAF3-202ENST00000351691 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 ABLIM1O14639 778 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 KCNK3O14649 394 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 NMT2O60551 498 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 ZBTB48P10074 688 aaPredicted RBP16.27■□□□□ 0.2
TRAF3-202ENST00000351691 TFAP4Q01664 338 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 TRAF1Q13077 416 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 GALNTL6Q49A17 601 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 CCDC38Q502W7 563 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 AIPL1Q9NZN9 384 aa16.27■□□□□ 0.2
TRAF3-202ENST00000351691 PP2D1A8MPX8 630 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 BACH1O14867 736 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.19
TRAF3-202ENST00000351691 TLR2O60603 784 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 BAG3O95817 575 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 LDHBP07195 334 aaKnown RBP16.27■□□□□ 0.19
TRAF3-202ENST00000351691 MMEP08473 750 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 FCER1AP12319 257 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 CHN1P15882 459 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 KCNMA1Q12791 1236 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 TMC4Q7Z404 712 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.19
TRAF3-202ENST00000351691 PROM2Q8N271 834 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 PNMA1Q8ND90 353 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 L3MBTL1Q9Y468 752 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
TRAF3-202ENST00000351691 FLOT1O75955 427 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 FLT3P36888 993 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 NCALDP61601 193 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 DHX9Q08211 1270 aaKnown RBP16.26■□□□□ 0.19
TRAF3-202ENST00000351691 CMPK2Q5EBM0 449 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 PLCD4Q9BRC7 762 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 TMEM60Q9H2L4 133 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 DIAPH2O60879 1101 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 OAS1P00973 400 aaKnown RBP16.26■□□□□ 0.19
TRAF3-202ENST00000351691 FAM83BQ5T0W9 1011 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 LRRC55Q6ZSA7 311 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 LRRC34Q8IZ02 419 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 IFT74Q96LB3 600 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
TRAF3-202ENST00000351691 CPSF2Q9P2I0 782 aaKnown RBP16.26■□□□□ 0.19
TRAF3-202ENST00000351691 SRP68Q9UHB9 627 aaKnown RBP16.26■□□□□ 0.19
TRAF3-202ENST00000351691 TTC7AQ9ULT0 858 aaPredicted RBP16.26■□□□□ 0.19
TRAF3-202ENST00000351691 RTCBQ9Y3I0 505 aaKnown RBP16.26■□□□□ 0.19
TRAF3-202ENST00000351691 CCDC194A0A1B0GVG4 234 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 CCDC169A6NNP5 214 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 DAPK3O43293 454 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 CEP104O60308 925 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 NOL4O94818 638 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 RARAP10276 462 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 PPP2R5EQ16537 467 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 UNC13DQ70J99 1090 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
TRAF3-202ENST00000351691 LRRC57Q8N9N7 239 aa16.25■□□□□ 0.19
TRAF3-202ENST00000351691 MDM1Q8TC05 714 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms