RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CALCOCO1Q9P1Z2 691 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 TMX2Q9Y320 296 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 RGPD3A6NKT7 1758 aaPredicted RBP24.3■■□□□ 1.48
UPF3A-201ENST00000351487 RGPD4Q7Z3J3 1758 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 NCK2O43639 380 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 NR3C1P04150 777 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 RPL13P26373 211 aaKnown RBP24.3■■□□□ 1.48
UPF3A-201ENST00000351487 PAFAH1B1P43034 410 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 WDR18Q9BV38 432 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 FBXL5Q9UKA1 691 aa24.3■■□□□ 1.48
UPF3A-201ENST00000351487 BTNL10A8MVZ5 291 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 AKAP3O75969 853 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 UCHL3P15374 230 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 KLRC1P26715 233 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 ECE1P42892 770 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 LRRC1Q9BTT6 524 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 LOXHD1Q8IVV2 1947 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 EIF3DO15371 548 aaKnown RBP eCLIP24.29■■□□□ 1.48
UPF3A-201ENST00000351487 PSMD10O75832 226 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 CXCR5P32302 372 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 PPP2R5CQ13362 524 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 KIAA1755Q5JYT7 1200 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 RINT1Q6NUQ1 792 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 OTOP1Q7RTM1 612 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 GOPCQ9HD26 462 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 RGL1Q9NZL6 768 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 TMOD2Q9NZR1 351 aa24.29■■□□□ 1.48
UPF3A-201ENST00000351487 BZW2Q9Y6E2 419 aaKnown RBP24.29■■□□□ 1.48
UPF3A-201ENST00000351487 PON1P27169 355 aa24.28■■□□□ 1.48
UPF3A-201ENST00000351487 EXOC3L4Q17RC7 722 aa24.28■■□□□ 1.48
UPF3A-201ENST00000351487 C10orf76Q5T2E6 689 aa24.28■■□□□ 1.48
UPF3A-201ENST00000351487 IRF2BP2Q7Z5L9 587 aa24.28■■□□□ 1.48
UPF3A-201ENST00000351487 PSMB7Q99436 277 aa24.28■■□□□ 1.48
UPF3A-201ENST00000351487 ADAMTS1Q9UHI8 967 aa24.28■■□□□ 1.48
UPF3A-201ENST00000351487 GCNT3O95395 438 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 SYF2O95926 243 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 EPB41P11171 864 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 SLC9A1P19634 815 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 NAP1L1P55209 391 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 EPHA7Q15375 998 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 NFIL3Q16649 462 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 SLC5A5Q92911 643 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 RANBP17Q9H2T7 1088 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 DMGDHQ9UI17 866 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 ATP8B3O60423 1300 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 TNS1Q9HBL0 1735 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 SPDYE2BA6NHP3 402 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 PALMO75781 387 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 SPDYE6P0CI01 402 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 ACTN1P12814 892 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 MUTP22033 750 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 LMAN1P49257 510 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 ARID5AQ03989 594 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 EZH2Q15910 746 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 KIAA0753Q2KHM9 967 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 CFAP221Q4G0U5 840 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 GSPT2Q8IYD1 628 aaKnown RBP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 SLC35C1Q96A29 364 aa24.27■■□□□ 1.48
UPF3A-201ENST00000351487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.27■■□□□ 1.48
UPF3A-201ENST00000351487 GTPBP10A4D1E9 387 aaKnown RBP24.26■■□□□ 1.47
UPF3A-201ENST00000351487 PPIP5K2O43314 1243 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 ANXA13P27216 316 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 TNFRSF8P28908 595 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 PRKCIP41743 596 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 MUM1L1Q5H9M0 696 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 LRCH2Q5VUJ6 765 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 ACER1Q8TDN7 264 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 HDAC7Q8WUI4 952 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 SPAG5Q96R06 1193 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 ZMYM2Q9UBW7 1377 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 GCOM1H8Y6P7 765 aaPredicted RBP24.26■■□□□ 1.47
UPF3A-201ENST00000351487 SLITRK3O94933 977 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 CFBP00751 764 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 POLR2MP0CAP2 368 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 PTK2Q05397 1052 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 GLE1Q53GS7 698 aaKnown RBP24.26■■□□□ 1.47
UPF3A-201ENST00000351487 C1orf186Q6ZWK4 172 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 EHD2Q9NZN4 543 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 ZBTB21Q9ULJ3 1066 aa24.26■■□□□ 1.47
UPF3A-201ENST00000351487 CTTNQ14247 550 aaKnown RBP24.25■■□□□ 1.47
UPF3A-201ENST00000351487 DCAF17Q5H9S7 520 aaPredicted RBP24.25■■□□□ 1.47
UPF3A-201ENST00000351487 MEI1Q5TIA1 1274 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 FAM151AQ8WW52 585 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 BORCS6Q96GS4 357 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 SIX2Q9NPC8 291 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 SMARCAL1Q9NZC9 954 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 STIM2Q9P246 746 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 FRMPD4Q14CM0 1322 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 TGFB1I1O43294 461 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 PLA2G6O60733 806 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 CASP4P49662 377 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 HNRNPH2P55795 449 aaKnown RBP24.25■■□□□ 1.47
UPF3A-201ENST00000351487 GBP6Q6ZN66 633 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 PACSIN1Q9BY11 444 aa24.25■■□□□ 1.47
UPF3A-201ENST00000351487 RBM12Q9NTZ6 932 aaKnown RBP24.25■■□□□ 1.47
UPF3A-201ENST00000351487 UBE4BO95155 1302 aa24.24■■□□□ 1.47
UPF3A-201ENST00000351487 A0A0U1RQG5 324 aaPredicted RBP24.24■■□□□ 1.47
UPF3A-201ENST00000351487 GRID2IPA4D2P6 1211 aa24.24■■□□□ 1.47
UPF3A-201ENST00000351487 TCP10L2B9ZVM9 353 aa24.24■■□□□ 1.47
UPF3A-201ENST00000351487 RNF40O75150 1001 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms