RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SLC12A3P55017 1021 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 POSTNQ15063 836 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 FAM160B1Q5W0V3 765 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 SV2BQ7L1I2 683 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 STAMQ92783 540 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 HOOK1Q9UJC3 728 aaKnown RBP30.22■■■□□ 2.43
SSBP4-202ENST00000348495 PRR29P0C7W0 189 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 HSPA1AP0DMV8 641 aaKnown RBP30.22■■■□□ 2.43
SSBP4-202ENST00000348495 HSPA1BP0DMV9 641 aaKnown RBP30.22■■■□□ 2.43
SSBP4-202ENST00000348495 YWHABP31946 246 aaKnown RBP30.22■■■□□ 2.43
SSBP4-202ENST00000348495 PNOCQ13519 176 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 ZSCAN23Q3MJ62 389 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 PLPPR4Q7Z2D5 763 aa30.22■■■□□ 2.43
SSBP4-202ENST00000348495 SYT2Q8N9I0 419 aaPredicted RBP30.22■■■□□ 2.43
SSBP4-202ENST00000348495 DBR1Q9UK59 544 aaKnown RBP30.22■■■□□ 2.43
SSBP4-202ENST00000348495 MYH9P35579 1960 aaKnown RBP30.21■■■□□ 2.43
SSBP4-202ENST00000348495 CNGA1P29973 690 aa30.21■■■□□ 2.43
SSBP4-202ENST00000348495 BHMT2Q9H2M3 363 aa30.21■■■□□ 2.43
SSBP4-202ENST00000348495 AZI2Q9H6S1 392 aa30.21■■■□□ 2.43
SSBP4-202ENST00000348495 NKX3-2P78367 333 aa30.2■■■□□ 2.43
SSBP4-202ENST00000348495 PRKCEQ02156 737 aa30.2■■■□□ 2.43
SSBP4-202ENST00000348495 ANO5Q75V66 913 aa30.2■■■□□ 2.43
SSBP4-202ENST00000348495 TRIM50Q86XT4 487 aa30.2■■■□□ 2.43
SSBP4-202ENST00000348495 ERCC4Q92889 916 aaPredicted RBP30.2■■■□□ 2.43
SSBP4-202ENST00000348495 UPF3AQ9H1J1 476 aaKnown RBP30.2■■■□□ 2.43
SSBP4-202ENST00000348495 ANKEF1Q9NU02 776 aa30.2■■■□□ 2.43
SSBP4-202ENST00000348495 LOXHD1Q8IVV2 1947 aa30.2■■■□□ 2.43
SSBP4-202ENST00000348495 GTPBP6O43824 516 aaPredicted RBP30.19■■■□□ 2.42
SSBP4-202ENST00000348495 MYL1P05976 194 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 CTCFP49711 727 aaPredicted RBP30.19■■■□□ 2.42
SSBP4-202ENST00000348495 UTP14CQ5TAP6 766 aaKnown RBP30.19■■■□□ 2.42
SSBP4-202ENST00000348495 CKAP2LQ8IYA6 745 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 AP5M1Q9H0R1 490 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 SMARCAD1Q9H4L7 1026 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.19■■■□□ 2.42
SSBP4-202ENST00000348495 LGALS2P05162 132 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 CASP1P29466 404 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 LBX1P52954 281 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 GJA9P57773 515 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 AMPD3Q01432 767 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 DPYDQ12882 1025 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 DHX8Q14562 1220 aaKnown RBP30.19■■■□□ 2.42
SSBP4-202ENST00000348495 DGKDQ16760 1214 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 XKR3Q5GH77 459 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 SPATA20Q8TB22 786 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 C7orf25Q9BPX7 421 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 C16orf70Q9BSU1 422 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 TRIM9Q9C026 710 aa30.19■■■□□ 2.42
SSBP4-202ENST00000348495 GZF1Q9H116 711 aaPredicted RBP30.19■■■□□ 2.42
SSBP4-202ENST00000348495 MYMKA6NI61 221 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 LETM1O95202 739 aaPredicted RBP30.18■■■□□ 2.42
SSBP4-202ENST00000348495 RARBP10826 455 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 RARRES1P49788 294 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 SLC26A2P50443 739 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 IRX5P78411 483 aaPredicted RBP30.18■■■□□ 2.42
SSBP4-202ENST00000348495 CUL4BQ13620 913 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 CNNM4Q6P4Q7 775 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 GLG1Q92896 1179 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 KIAA1468Q9P260 1216 aa30.18■■■□□ 2.42
SSBP4-202ENST00000348495 TMEM150BA6NC51 233 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 OATP04181 439 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 CPT1AP50416 773 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 LRRC27Q9C0I9 530 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 BLZF1Q9H2G9 400 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 PCDHA5Q9Y5H7 936 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 SYNRGQ9UMZ2 1314 aa30.17■■■□□ 2.42
SSBP4-202ENST00000348495 SSBP05455 408 aaKnown RBP eCLIP30.16■■■□□ 2.42
SSBP4-202ENST00000348495 CYP11B2P19099 503 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 ARSHQ5FYA8 562 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 NT5DC1Q5TFE4 455 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 CTU1Q7Z7A3 348 aaKnown RBP30.16■■■□□ 2.42
SSBP4-202ENST00000348495 SH3TC2Q8TF17 1288 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 DDX20Q9UHI6 824 aaKnown RBP30.16■■■□□ 2.42
SSBP4-202ENST00000348495 TUBE1Q9UJT0 475 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 SARSP49591 514 aaKnown RBP30.16■■■□□ 2.42
SSBP4-202ENST00000348495 FSCN1Q16658 493 aaKnown RBP30.16■■■□□ 2.42
SSBP4-202ENST00000348495 OTUD6AQ7L8S5 288 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 GPBP1Q86WP2 473 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 NIFKQ9BYG3 293 aaKnown RBP30.16■■■□□ 2.42
SSBP4-202ENST00000348495 ERAP1Q9NZ08 941 aa30.16■■■□□ 2.42
SSBP4-202ENST00000348495 SYCE3A1L190 88 aa30.15■■■□□ 2.42
SSBP4-202ENST00000348495 PLA2G4FQ68DD2 849 aa30.15■■■□□ 2.42
SSBP4-202ENST00000348495 RINT1Q6NUQ1 792 aa30.15■■■□□ 2.42
SSBP4-202ENST00000348495 FAM167AQ96KS9 214 aa30.15■■■□□ 2.42
SSBP4-202ENST00000348495 HMX1Q9NP08 348 aaPredicted RBP30.15■■■□□ 2.42
SSBP4-202ENST00000348495 ADAMTS4O75173 837 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 ZNF286BP0CG31 522 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 PLCB4Q15147 1175 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 C1orf186Q6ZWK4 172 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 ATP8B4Q8TF62 1192 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 DDX12PQ92771 950 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 RUSC1Q9BVN2 902 aa30.14■■■□□ 2.42
SSBP4-202ENST00000348495 ARHGEF35A5YM69 484 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 MYADML2A6NDP7 307 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 NPEPPSP55786 919 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 BEX3Q00994 111 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 BRDTQ58F21 947 aaPredicted RBP30.13■■■□□ 2.41
SSBP4-202ENST00000348495 TRMT1LQ7Z2T5 733 aaKnown RBP30.13■■■□□ 2.41
SSBP4-202ENST00000348495 BBXQ8WY36 941 aaPredicted RBP30.13■■■□□ 2.41
SSBP4-202ENST00000348495 DNAJC19Q96DA6 116 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms