RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 RARRES1P49788 294 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 INHBEP58166 350 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 ANKRD40Q6AI12 368 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 PADI6Q6TGC4 694 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 CYFIP1Q7L576 1253 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 SFR1Q86XK3 245 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 PARVGQ9HBI0 331 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 TBC1D7Q9P0N9 293 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 IMPACTQ9P2X3 320 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 GABBR1Q9UBS5 961 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 LIMA1Q9UHB6 759 aaKnown RBP20.69■□□□□ 0.9
PTN-201ENST00000348225 WDR81Q562E7 1941 aa20.69■□□□□ 0.9
PTN-201ENST00000348225 KCNJ18B7U540 433 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 SUPT20HL2P0C7V6 817 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 EEF1GP26641 437 aaKnown RBP20.68■□□□□ 0.9
PTN-201ENST00000348225 ADORA2AP29274 412 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 SP2Q02086 613 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 SP4Q02446 784 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 KCNJ12Q14500 433 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 LRRC41Q15345 812 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 ABHD15Q6UXT9 468 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 OTUD6AQ7L8S5 288 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 CCDC102AQ96A19 550 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 NAP1L5Q96NT1 182 aaPredicted RBP20.68■□□□□ 0.9
PTN-201ENST00000348225 TIPINQ9BVW5 301 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 SRRTQ9BXP5 876 aaKnown RBP20.68■□□□□ 0.9
PTN-201ENST00000348225 SEMA6BQ9H3T3 888 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 OLFML3Q9NRN5 406 aa20.68■□□□□ 0.9
PTN-201ENST00000348225 A0A1B0GTH6 734 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 ZNF792Q3KQV3 632 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 TCP11X2Q5H9J9 407 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 EEPD1Q7L9B9 569 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 DUSP9Q99956 384 aaKnown RBP20.67■□□□□ 0.9
PTN-201ENST00000348225 IGF2BP3O00425 579 aaKnown RBP eCLIP20.67■□□□□ 0.9
PTN-201ENST00000348225 BACH1O14867 736 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 ZNF131P52739 623 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 TAF1CQ15572 869 aaPredicted RBP20.67■□□□□ 0.9
PTN-201ENST00000348225 SWSAP1Q6NVH7 229 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 CCDC186Q7Z3E2 898 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 TMC6Q7Z403 805 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 GPR142Q7Z601 462 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 PLEKHH3Q7Z736 793 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 ZNF467Q7Z7K2 595 aaPredicted RBP20.67■□□□□ 0.9
PTN-201ENST00000348225 ZSCAN30Q86W11 494 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 MYCT1Q8N699 235 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 GLIS3Q8NEA6 775 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 BCAS3Q9H6U6 928 aa20.67■□□□□ 0.9
PTN-201ENST00000348225 MRPL44Q9H9J2 332 aaKnown RBP20.67■□□□□ 0.9
PTN-201ENST00000348225 IGSF9BQ9UPX0 1349 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 FARP2O94887 1054 aaPredicted RBP20.66■□□□□ 0.9
PTN-201ENST00000348225 ATG7O95352 703 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 GSDMDP57764 484 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 GRB14Q14449 540 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 XKR9Q5GH70 373 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 METTL7BQ6UX53 244 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 STXBP4Q6ZWJ1 553 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 SCFD1Q8WVM8 642 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 ABT1Q9ULW3 272 aaKnown RBP20.66■□□□□ 0.9
PTN-201ENST00000348225 ADGRA2Q96PE1 1338 aa20.66■□□□□ 0.9
PTN-201ENST00000348225 ZNF236Q9UL36 1845 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 LRRC10BA6NIK2 292 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 KIF3CO14782 793 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 SORBS3O60504 671 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 GGPS1O95749 300 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 KRT31Q15323 416 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 ARMCX2Q7L311 632 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 APTXQ7Z2E3 356 aaKnown RBP20.65■□□□□ 0.9
PTN-201ENST00000348225 FILIP1Q7Z7B0 1213 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 VSTM4Q8IW00 320 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 CCDC60Q8IWA6 550 aaPredicted RBP20.65■□□□□ 0.9
PTN-201ENST00000348225 FGFBP2Q9BYJ0 223 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 NRBP1Q9UHY1 535 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 ZKSCAN5Q9Y2L8 839 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 SYNGAP1Q96PV0 1343 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 MYH11P35749 1972 aa20.65■□□□□ 0.9
PTN-201ENST00000348225 USO1O60763 962 aaKnown RBP20.64■□□□□ 0.9
PTN-201ENST00000348225 HIP1RO75146 1068 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 TPM2P07951 284 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 PTGS1P23219 599 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 NR1I3Q14994 352 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 BMT2Q1RMZ1 405 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 EPM2AIP1Q7L775 607 aaPredicted RBP20.64■□□□□ 0.9
PTN-201ENST00000348225 DPP9Q86TI2 863 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 IFNL1Q8IU54 200 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 FBXO16Q8IX29 292 aaPredicted RBP20.64■□□□□ 0.9
PTN-201ENST00000348225 HHIPL1Q96JK4 782 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 ZNF302Q9NR11 478 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 INTS13Q9NVM9 706 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 CPA4Q9UI42 421 aa20.64■□□□□ 0.9
PTN-201ENST00000348225 DDX41Q9UJV9 622 aaKnown RBP20.64■□□□□ 0.9
PTN-201ENST00000348225 DIS3Q9Y2L1 958 aaKnown RBP20.64■□□□□ 0.9
PTN-201ENST00000348225 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.64■□□□□ 0.9
PTN-201ENST00000348225 UBE4BO95155 1302 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 MCM3APO60318 1980 aa20.64■□□□□ 0.89
PTN-201ENST00000348225 MYH9P35579 1960 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms