RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ZNRF3Q9ULT6 936 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 NDC80O14777 642 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 SUN1O94901 812 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 HSPA6P17066 643 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 TSNAXIP1Q2TAA8 658 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 CDHR1Q96JP9 859 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 ZNF341Q9BYN7 854 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 ZMYND12Q9H0C1 365 aa15.99■□□□□ 0.15
NUP50-201ENST00000347635 TAF1DQ9H5J8 278 aaPredicted RBP15.99■□□□□ 0.15
NUP50-201ENST00000347635 FGGP02679 453 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 ATF2P15336 505 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 DNAJC7Q99615 494 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 VPS37BQ9H9H4 285 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 ANAPC4Q9UJX5 808 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 L1RE1Q9UN81 338 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 NOD1Q9Y239 953 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
NUP50-201ENST00000347635 NLRP14Q86W24 1093 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 SLC44A5Q8NCS7 719 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 EIF3HO15372 352 aaKnown RBP eCLIP15.98■□□□□ 0.15
NUP50-201ENST00000347635 PPM1KQ8N3J5 372 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 DIS3Q9Y2L1 958 aaKnown RBP15.98■□□□□ 0.15
NUP50-201ENST00000347635 BCL9O00512 1426 aa15.98■□□□□ 0.15
NUP50-201ENST00000347635 NSUN4Q96CB9 384 aaKnown RBP15.98■□□□□ 0.15
NUP50-201ENST00000347635 HERC5Q9UII4 1024 aaKnown RBP15.98■□□□□ 0.15
NUP50-201ENST00000347635 PACSIN2Q9UNF0 486 aaPredicted RBP15.98■□□□□ 0.15
NUP50-201ENST00000347635 PRPF6O94906 941 aaKnown RBP15.97■□□□□ 0.15
NUP50-201ENST00000347635 GDF11O95390 407 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 RASSF2P50749 326 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 KCNH2Q12809 1159 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 PSMD1Q99460 953 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 TACO1Q9BSH4 297 aaKnown RBP15.97■□□□□ 0.15
NUP50-201ENST00000347635 LARSQ9P2J5 1176 aaKnown RBP15.97■□□□□ 0.15
NUP50-201ENST00000347635 LRRN2O75325 713 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 KLK7P49862 253 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 NEDD9Q14511 834 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 SLMAPQ14BN4 828 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 ARHGEF2Q92974 986 aaKnown RBP15.97■□□□□ 0.15
NUP50-201ENST00000347635 HPS3Q969F9 1004 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 SASH3O75995 380 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 VPS41P49754 854 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 MMGT1Q8N4V1 131 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.97■□□□□ 0.15
NUP50-201ENST00000347635 MAK16Q9BXY0 300 aaKnown RBP15.97■□□□□ 0.15
NUP50-201ENST00000347635 PNMA3Q9UL41 463 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 TFR2Q9UP52 801 aa15.97■□□□□ 0.15
NUP50-201ENST00000347635 TESPA1A2RU30 521 aaPredicted RBP15.96■□□□□ 0.15
NUP50-201ENST00000347635 CIB2O75838 187 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 NCAPG2Q86XI2 1143 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 P3H4Q92791 437 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 E9PMD0 336 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 ZRANB2O95218 330 aaKnown RBP eCLIP15.96■□□□□ 0.15
NUP50-201ENST00000347635 STK4Q13043 487 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 E2F5Q15329 346 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 BBOF1Q8ND07 529 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 SLC17A8Q8NDX2 589 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 SREK1Q8WXA9 508 aaKnown RBP15.96■□□□□ 0.15
NUP50-201ENST00000347635 MCUR1Q96AQ8 359 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 ECEL1O95672 775 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 MMP14P50281 582 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 PPP1R18Q6NYC8 613 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 ANO3Q9BYT9 981 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 WDR11Q9BZH6 1224 aa15.96■□□□□ 0.15
NUP50-201ENST00000347635 GMNCA6NCL1 334 aa15.96■□□□□ 0.14
NUP50-201ENST00000347635 LRRIQ3A6PVS8 624 aaPredicted RBP15.96■□□□□ 0.14
NUP50-201ENST00000347635 STAMBPO95630 424 aa15.96■□□□□ 0.14
NUP50-201ENST00000347635 FDX1P10109 184 aa15.96■□□□□ 0.14
NUP50-201ENST00000347635 MAN1A1P33908 653 aa15.96■□□□□ 0.14
NUP50-201ENST00000347635 TCP11Q8WWU5 503 aa15.96■□□□□ 0.14
NUP50-201ENST00000347635 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.96■□□□□ 0.147e-6■□□□□ 9.4
NUP50-201ENST00000347635 MFAP3P55082 362 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 GUCY1A3Q02108 690 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 MS4A14Q96JA4 679 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 SPZ1Q9BXG8 430 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 ODF2LQ9ULJ1 636 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 SLCO1A2P46721 670 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 PPP2R2AP63151 447 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 SBK1Q52WX2 424 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 FAM102BQ5T8I3 360 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 DCUN1D2Q6PH85 259 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
NUP50-201ENST00000347635 SSU72P8A0A1W2PR75 194 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 IQCA1LA6NCM1 817 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 M0QZ92 97 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 HARSP12081 509 aaKnown RBP15.95■□□□□ 0.14
NUP50-201ENST00000347635 FAM133BQ5BKY9 247 aaKnown RBP15.95■□□□□ 0.14
NUP50-201ENST00000347635 C6orf118Q5T5N4 469 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 C12orf60Q5U649 245 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 FAM160B1Q5W0V3 765 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 FBXO33Q7Z6M2 555 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 HIP1RO75146 1068 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 TDP2O95551 362 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 ADCY2Q08462 1091 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 CCDC62Q6P9F0 684 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 HHIPL2Q6UWX4 724 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 LRRC31Q6UY01 552 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 CEP95Q96GE4 821 aa15.95■□□□□ 0.14
NUP50-201ENST00000347635 FAM237AA0A1B0GTK4 181 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 RASGRF2O14827 1237 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms