RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 STK17AQ9UEE5 414 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 EMSYQ7Z589 1322 aa21.24■□□□□ 0.99
CHMP4A-201ENST00000347519 PGK1P00558 417 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 LGALS2P05162 132 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 ZNF286BP0CG31 522 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 MUTP22033 750 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 AFMP43652 599 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 STAT5BP51692 787 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 GJA9P57773 515 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 MDM2Q00987 491 aaPredicted RBP21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 DHX8Q14562 1220 aaKnown RBP21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 PYM1Q9BRP8 204 aaKnown RBP21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 DDX20Q9UHI6 824 aaKnown RBP21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 USP25Q9UHP3 1055 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 LOXHD1Q8IVV2 1947 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 CENPFP49454 3210 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 ADAMTS4O75173 837 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 EYA4O95677 639 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 PLA2G4BP0C869 781 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 RARBP10826 455 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 SLC12A3P55017 1021 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 PRKCEQ02156 737 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 MTFR1Q15390 333 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 FAM160B1Q5W0V3 765 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 PLA2G4FQ68DD2 849 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 ANO5Q75V66 913 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 CEP57L1Q8IYX8 460 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 LARP4BQ92615 738 aaKnown RBP21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 ATP6V0A1Q93050 837 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 NACC1Q96RE7 527 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 SH2D3AQ9BRG2 576 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 C16orf70Q9BSU1 422 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 NUP62CLQ9H1M0 184 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 HMX1Q9NP08 348 aaPredicted RBP21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 KBTBD4Q9NVX7 518 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 DNM3Q9UQ16 869 aa21.23■□□□□ 0.99
CHMP4A-201ENST00000347519 PPFIA4O75335 1185 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 MYCP01106 439 aaPredicted RBP21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 MARK3P27448 753 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 YWHABP31946 246 aaKnown RBP21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 PNOCQ13519 176 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 FSCN1Q16658 493 aaKnown RBP21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 SLC9C1Q4G0N8 1177 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 CCDC183Q5T5S1 534 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 LHX8Q68G74 356 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 FBXO46Q6PJ61 603 aaPredicted RBP21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 PLPPR4Q7Z2D5 763 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 GLG1Q92896 1179 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 MCOLN1Q9GZU1 580 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 BHMT2Q9H2M3 363 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 CUEDC2Q9H467 287 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 XPNPEP3Q9NQH7 507 aa21.22■□□□□ 0.99
CHMP4A-201ENST00000347519 MYMKA6NI61 221 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 SSBP05455 408 aaKnown RBP eCLIP21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 C6orf222P0C671 652 aaPredicted RBP21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 NPEPPSP55786 919 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 NKX3-2P78367 333 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 PLCB4Q15147 1175 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 DGKDQ16760 1214 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 SYT2Q8N9I0 419 aaPredicted RBP21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 BLZF1Q9H2G9 400 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 SMARCAD1Q9H4L7 1026 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 AZI2Q9H6S1 392 aa21.21■□□□□ 0.99
CHMP4A-201ENST00000347519 OATP04181 439 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 CUL4BQ13620 913 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 ARSHQ5FYA8 562 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 SV2BQ7L1I2 683 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 CKAP2LQ8IYA6 745 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 KLHDC9Q8NEP7 349 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 KAT2BQ92831 832 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 RUSC1Q9BVN2 902 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 RNPEPQ9H4A4 650 aa21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 SEPT9Q9UHD8 586 aaPredicted RBP21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 DBR1Q9UK59 544 aaKnown RBP21.2■□□□□ 0.98
CHMP4A-201ENST00000347519 NPHP3-ACAD11A0A0J9YXS1 232 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 DKC1O60832 514 aaKnown RBP eCLIP21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 MYL3P08590 195 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 CYP11B2P19099 503 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 RARRES1P49788 294 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 CPT1AP50416 773 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 POSTNQ15063 836 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 XKR3Q5GH77 459 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 ELOA2Q8IYF1 753 aaPredicted RBP21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 KCTD17Q8N5Z5 321 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 PPP1R13LQ8WUF5 828 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 TNMDQ9H2S6 317 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 MAGEF1Q9HAY2 307 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 ANKEF1Q9NU02 776 aa21.19■□□□□ 0.98
CHMP4A-201ENST00000347519 CCDC85CA6NKD9 419 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 XRCC6P12956 609 aaKnown RBP eCLIP21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 CCL5P13501 91 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 DPYDQ12882 1025 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 XKR9Q5GH70 373 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 GNASQ5JWF2 1037 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 CCSAPQ6IQ19 270 aaPredicted RBP21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 GPBP1Q86WP2 473 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 ATP8B4Q8TF62 1192 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 CEP89Q96ST8 783 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms