RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 SUN1O94901 812 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 COBLL1Q53SF7 1204 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 TATDN2Q93075 761 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 THOC1Q96FV9 657 aaKnown RBP16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 BLOC1S4Q9NUP1 217 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 CFAP73A6NFT4 308 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 ERFEQ4G0M1 354 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 NAP1L4Q99733 375 aaKnown RBP16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 TJP1Q07157 1748 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 MPHOSPH10O00566 681 aaKnown RBP16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 CES2O00748 559 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 PDIA5Q14554 519 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 ANKRD42Q8N9B4 389 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 MIEF2Q96C03 454 aa16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 METTL14Q9HCE5 456 aaKnown RBP16.9■□□□□ 0.3
R3HDM2-201ENST00000347140 NKRFO15226 690 aaKnown RBP eCLIP16.89■□□□□ 0.31e-6■■□□□ 12.6
R3HDM2-201ENST00000347140 ATP5DP30049 168 aa16.89■□□□□ 0.3
R3HDM2-201ENST00000347140 ADCY2Q08462 1091 aa16.89■□□□□ 0.3
R3HDM2-201ENST00000347140 CCDC105Q8IYK2 499 aa16.89■□□□□ 0.3
R3HDM2-201ENST00000347140 OSBPL7Q9BZF2 842 aa16.89■□□□□ 0.3
R3HDM2-201ENST00000347140 GCNT4Q9P109 453 aa16.89■□□□□ 0.3
R3HDM2-201ENST00000347140 GSTTP1A0A1W2PQM5 241 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 E9PMD0 336 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 GHRP10912 638 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 ZNF76P36508 570 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 PEX19P40855 299 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 TMC3Q7Z5M5 1100 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 NBPF5PQ86XG9 351 aaPredicted RBP16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 TPCN2Q8NHX9 752 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 AKAP11Q9UKA4 1901 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 F8VZ95 297 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 UCHL3P15374 230 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 LMNB1P20700 586 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 ASTE1Q2TB18 679 aaPredicted RBP16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 FAM129AQ9BZQ8 928 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 DNM1LO00429 736 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 CYTH3O43739 400 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 ITGA4P13612 1032 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
R3HDM2-201ENST00000347140 RASGRF2O14827 1237 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 TLR2O60603 784 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 GCNT3O95395 438 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 SLC9A1P19634 815 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 PDE6CP51160 858 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 PAIP2Q9BPZ3 127 aaKnown RBP16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 AIPL1Q9NZN9 384 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 DNM3Q9UQ16 869 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 PALM3A6NDB9 673 aaPredicted RBP16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 hCG_1984214I3L0E3 225 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 ATP6V1G2O95670 118 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 GBP1P32455 592 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 SARNPP82979 210 aaKnown RBP16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 DNAAF5Q86Y56 855 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 ZNF713Q8N859 430 aaPredicted RBP16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 SUCLA2Q9P2R7 463 aaPredicted RBP16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 OPLAHO14841 1288 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 CAND2O75155 1236 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 UBE2SQ16763 222 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 KIRREL3Q8IZU9 778 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 MMTAG2Q9BU76 263 aaKnown RBP16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 NKIRAS1Q9NYS0 192 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 ZNF804BA4D1E1 1349 aa16.88■□□□□ 0.29
R3HDM2-201ENST00000347140 CAMTA1Q9Y6Y1 1673 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 DNAJC8O75937 253 aaPredicted RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 INTS8Q75QN2 995 aaKnown RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 TRPM8Q7Z2W7 1104 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 LRRC15Q8TF66 581 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 PRMT1Q99873 361 aaKnown RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 ECM29Q5VYK3 1845 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 SLMAPQ14BN4 828 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 ZKSCAN8Q15776 578 aaPredicted RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 ZNF571Q7Z3V5 609 aaPredicted RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 TRIM59Q8IWR1 403 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 FBF1Q8TES7 1133 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 SLC37A4O43826 429 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 LRRC34Q8IZ02 419 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 LRRC47Q8N1G4 583 aaKnown RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 NSMCE1Q8WV22 266 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 HOOK2Q96ED9 719 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 FAM13AO94988 1023 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 PLCG2P16885 1265 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 CETN1Q12798 172 aa16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 ZNF211Q13398 564 aaPredicted RBP16.87■□□□□ 0.29
R3HDM2-201ENST00000347140 SETDB1Q15047 1291 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms