RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 XAB2Q9HCS7 855 aaKnown RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 CLASP1Q7Z460 1538 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 DPYSL4O14531 572 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 HOXA13P31271 388 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 MAP2K2P36507 400 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 ADCY1Q08828 1119 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 STXBP2Q15833 593 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 KIAA1755Q5JYT7 1200 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 ZWILCHQ9H900 591 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 SRPRBQ9Y5M8 271 aaKnown RBP24.83■■□□□ 1.57
NPAS3-201ENST00000346562 EFCAB6Q5THR3 1501 aa24.83■■□□□ 1.57
NPAS3-201ENST00000346562 ASNSP08243 561 aa24.83■■□□□ 1.56
NPAS3-201ENST00000346562 ZBED6P86452 979 aa24.83■■□□□ 1.56
NPAS3-201ENST00000346562 POLIQ9UNA4 740 aa24.83■■□□□ 1.56
NPAS3-201ENST00000346562 ATF5Q9Y2D1 282 aaPredicted RBP24.83■■□□□ 1.56
NPAS3-201ENST00000346562 PCDHA13Q9Y5I0 950 aa24.83■■□□□ 1.56
NPAS3-201ENST00000346562 FTCDO95954 541 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 IFNAR1P17181 557 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 DR1Q01658 176 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 ADCK5Q3MIX3 580 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 TXLNGQ9NUQ3 528 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 ANKARQ7Z5J8 1434 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 STK25O00506 426 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 PHKA2P46019 1235 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 KLC2Q9H0B6 622 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 RRAGDQ9NQL2 400 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-201ENST00000346562 FEM1BQ9UK73 627 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 DIS3Q9Y2L1 958 aaKnown RBP24.82■■□□□ 1.56
NPAS3-201ENST00000346562 ATP7BP35670 1465 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 ESRRGP62508 458 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 ZNF589Q86UQ0 364 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-201ENST00000346562 HPCAL4Q9UM19 191 aa24.82■■□□□ 1.56
NPAS3-201ENST00000346562 EIF4A3P38919 411 aaKnown RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 DHX9Q08211 1270 aaKnown RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 KRT39Q6A163 491 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 TTC19Q6DKK2 380 aaPredicted RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 HOXC10Q9NYD6 342 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 GOLGA8IPA6NC78 632 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 GOLGA8JA6NMD2 632 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 KIAA1586Q9HCI6 787 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 CDO1Q16878 200 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 ARL6IP4Q66PJ3 421 aaKnown RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 TTC30AQ86WT1 665 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 PIM2Q9P1W9 311 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 HEG1Q9ULI3 1381 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 MYCP01106 439 aaPredicted RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 RWDD2BP57060 319 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 RHOT2Q8IXI1 618 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 GPT2Q8TD30 523 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 PUS7LQ9H0K6 701 aaKnown RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 TJP3O95049 919 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 ARHGEF25Q86VW2 580 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 FAF2Q96CS3 445 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 CALR3Q96L12 384 aaKnown RBP24.81■■□□□ 1.56
NPAS3-201ENST00000346562 MOSPD1Q9UJG1 213 aa24.81■■□□□ 1.56
NPAS3-201ENST00000346562 DENND3A2RUS2 1198 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 TRIP13Q15645 432 aaPredicted RBP24.8■■□□□ 1.56
NPAS3-201ENST00000346562 ZKSCAN8Q15776 578 aaPredicted RBP24.8■■□□□ 1.56
NPAS3-201ENST00000346562 BBS9Q3SYG4 887 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 PDCD7Q8N8D1 485 aaKnown RBP24.8■■□□□ 1.56
NPAS3-201ENST00000346562 ANTXR1Q9H6X2 564 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 ATP8B1O43520 1251 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 ARHGDIAP52565 204 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 DRP2Q13474 957 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 UNC5CLQ8IV45 518 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 PDIK1LQ8N165 341 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 IFT43Q96FT9 208 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 HACD3Q9P035 362 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 ZNF212Q9UDV6 495 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 PYROXD1Q8WU10 500 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 PAGE5Q96GU1 130 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 NCF2P19878 526 aaPredicted RBP24.8■■□□□ 1.56
NPAS3-201ENST00000346562 PEX3P56589 373 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 GRAMD1CQ8IYS0 662 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 HINFPQ9BQA5 517 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 GINM1Q9NU53 330 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 ITM2BQ9Y287 266 aa24.8■■□□□ 1.56
NPAS3-201ENST00000346562 IGSF1Q8N6C5 1336 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 MAP3K7O43318 606 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 RASIP1Q5U651 963 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 RASEFQ8IZ41 740 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 UBE2Q2Q8WVN8 375 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 EIF2AQ9BY44 585 aaKnown RBP24.79■■□□□ 1.56
NPAS3-201ENST00000346562 SAMD9Q5K651 1589 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 MTMR1Q13613 665 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 ANGPTL8Q6UXH0 198 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 SNX19Q92543 992 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 SNX2O60749 519 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 NFX1Q12986 1120 aaKnown RBP24.79■■□□□ 1.56
NPAS3-201ENST00000346562 TMED8Q6PL24 325 aaPredicted RBP24.79■■□□□ 1.56
NPAS3-201ENST00000346562 LRRC31Q6UY01 552 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 NEK9Q8TD19 979 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 ESRRBO95718 433 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 LIG3P49916 1009 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 LINC00301Q8NCQ3 95 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 EXT2Q93063 718 aa24.79■■□□□ 1.56
NPAS3-201ENST00000346562 BEST2Q8NFU1 509 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 ZNF500O60304 480 aaPredicted RBP24.78■■□□□ 1.56
NPAS3-201ENST00000346562 PRELPP51888 382 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 EIF3BP55884 814 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms