RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 IGBP1P78318 339 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
HMGN3-202ENST00000344726 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 CCDC60Q8IWA6 550 aaPredicted RBP16.38■□□□□ 0.21
HMGN3-202ENST00000344726 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 NECAB1Q8N987 351 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 DAGLBQ8NCG7 672 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 TRAPPC12Q8WVT3 735 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 STK36Q9NRP7 1315 aa16.38■□□□□ 0.21
HMGN3-202ENST00000344726 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
HMGN3-202ENST00000344726 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
HMGN3-202ENST00000344726 MSH4O15457 936 aa16.37■□□□□ 0.21
HMGN3-202ENST00000344726 DNAJB3Q8WWF6 145 aa16.37■□□□□ 0.21
HMGN3-202ENST00000344726 PHF20Q9BVI0 1012 aa16.37■□□□□ 0.21
HMGN3-202ENST00000344726 MTCH2Q9Y6C9 303 aa16.37■□□□□ 0.21
HMGN3-202ENST00000344726 MUC3AQ02505 3323 aa16.37■□□□□ 0.21
HMGN3-202ENST00000344726 LINC01553A4QN01 128 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 EFCAB14O75071 495 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 CDKL5O76039 1030 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 GHRP10912 638 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
HMGN3-202ENST00000344726 ATP4AP20648 1035 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 USP11P51784 963 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 GRB10Q13322 594 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 LPIN1Q14693 890 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 TAF2Q6P1X5 1199 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 MYOCDQ8IZQ8 938 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 MICALL1Q8N3F8 863 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 SEPT8Q92599 483 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 GJA10Q969M2 543 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 RAD9AQ99638 391 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 ZBED2Q9BTP6 218 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 TBC1D22BQ9NU19 505 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 COL4A6Q14031 1691 aa16.36■□□□□ 0.21
HMGN3-202ENST00000344726 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 BACH1O14867 736 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 EIF5BO60841 1220 aaKnown RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 TDP2O95551 362 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 AMHP03971 560 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 POU3F3P20264 500 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 HTRA4P83105 476 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 ZNF746Q6NUN9 644 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 SWSAP1Q6NVH7 229 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 FAM177A1Q8N128 213 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 GDPD5Q8WTR4 605 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 IFIH1Q9BYX4 1025 aaKnown RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 FAM49AQ9H0Q0 323 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 ZNF302Q9NR11 478 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-202ENST00000344726 MTUS1Q9ULD2 1270 aa16.35■□□□□ 0.21
HMGN3-202ENST00000344726 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 ZBTB42B2RXF5 422 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 INF2Q27J81 1249 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 Q4G0T1 1027 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 FBXO47Q5MNV8 452 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 MIS18BP1Q6P0N0 1132 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 NSUN7Q8NE18 718 aaKnown RBP16.34■□□□□ 0.21
HMGN3-202ENST00000344726 SP7Q8TDD2 431 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-202ENST00000344726 LINC01599Q8WXQ3 324 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 SLC5A5Q92911 643 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 KIF2CQ99661 725 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
HMGN3-202ENST00000344726 CDY2AQ9Y6F7 541 aa16.34■□□□□ 0.21
HMGN3-202ENST00000344726 TTC3P53804 2025 aa16.33■□□□□ 0.21
HMGN3-202ENST00000344726 TTC28Q96AY4 2481 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 CYP3A7-CYP3A51PA0A087WV96 503 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 JAK2O60674 1132 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 CYP3A7P24462 503 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 SLC26A2P50443 739 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 ERVK-21P61565 698 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 MRPS6P82932 125 aaKnown RBP16.33■□□□□ 0.2
HMGN3-202ENST00000344726 KRT76Q01546 638 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGN3-202ENST00000344726 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
HMGN3-202ENST00000344726 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 PDXDC2PQ6P474 469 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.2
HMGN3-202ENST00000344726 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 MBOAT7Q96N66 472 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 C17orf80Q9BSJ5 609 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 C22orf23Q9BZE7 217 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 SUGCTQ9HAC7 445 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 PCDHA2Q9Y5H9 948 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 PCDHA10Q9Y5I2 948 aa16.33■□□□□ 0.2
HMGN3-202ENST00000344726 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
HMGN3-202ENST00000344726 HBP1O60381 514 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 PSMD10O75832 226 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms