RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GALNTL6Q49A17 601 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 DUPD1Q68J44 220 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 BZW1Q7L1Q6 419 aaKnown RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NT5DC3Q86UY8 548 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 COL23A1Q86Y22 540 aaPredicted RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 SYCE1Q8N0S2 351 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 ACSBG1Q96GR2 724 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 RAB17Q9H0T7 212 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NOP53Q9NZM5 478 aaKnown RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 TRAF5O00463 557 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 RPSAP08865 295 aaKnown RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NQO1P15559 274 aaKnown RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 GNA11P29992 359 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 CCNHP51946 323 aaPredicted RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 ZNF131P52739 623 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NAPAP54920 295 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 PTENP60484 403 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NCALDP61601 193 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 TFAP4Q01664 338 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 PDIA5Q14554 519 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 LRRC41Q15345 812 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NAIF1Q69YI7 327 aaPredicted RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 CROCCP2Q86T23 111 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 AGAP11Q8TF27 550 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 LMBR1Q8WVP7 490 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 TBC1D31Q96DN5 1066 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 ZNF570Q96NI8 536 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 PABPC3Q9H361 631 aaKnown RBP10.53□□□□□ -0.72
HOXA1-201ENST00000343060 GOLPH3Q9H4A6 298 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 C6orf50Q9HD87 102 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 PCDHA2Q9Y5H9 948 aa10.53□□□□□ -0.72
HOXA1-201ENST00000343060 NCANO14594 1321 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 FRMD3A2A2Y4 597 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 FAM187AA6NFU0 413 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 CCDC169A6NNP5 214 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 SMNDC1O75940 238 aaKnown RBP eCLIP10.52□□□□□ -0.72
HOXA1-201ENST00000343060 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.72
HOXA1-201ENST00000343060 ANP32DO95626 131 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 AGTP01019 485 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 ATF3P18847 181 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 CCNG1P51959 295 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 DRG2P55039 364 aaKnown RBP10.52□□□□□ -0.72
HOXA1-201ENST00000343060 MECOMQ03112 1051 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 KLRC3Q07444 240 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 PARP10Q53GL7 1025 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 FAM26FQ5R3K3 315 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 PEX26Q7Z412 305 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 KCNK18Q7Z418 384 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 NEK9Q8TD19 979 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 TBCKQ8TEA7 893 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 NSRP1Q9H0G5 558 aaKnown RBP10.52□□□□□ -0.72
HOXA1-201ENST00000343060 PRDM11Q9NQV5 511 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 SAMD15Q9P1V8 674 aa10.52□□□□□ -0.72
HOXA1-201ENST00000343060 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.72
HOXA1-201ENST00000343060 FLOT1O75955 427 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 NTSR2O95665 410 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 RARAP10276 462 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 CALCRLQ16602 461 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 ALKBH5Q6P6C2 394 aaKnown RBP10.52□□□□□ -0.73
HOXA1-201ENST00000343060 BTNL9Q6UXG8 535 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 PPP4R3CPQ6ZMV5 832 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 CDK5RAP3Q96JB5 506 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 CELF4Q9BZC1 486 aaKnown RBP10.52□□□□□ -0.73
HOXA1-201ENST00000343060 KCTD10Q9H3F6 313 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 CNOT7Q9UIV1 285 aaKnown RBP10.52□□□□□ -0.73
HOXA1-201ENST00000343060 ATP8A1Q9Y2Q0 1164 aa10.52□□□□□ -0.73
HOXA1-201ENST00000343060 SMCO2A6NFE2 343 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 SNX3O60493 162 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 SHBGP04278 402 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 CCND1P24385 295 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 SMARCA1P28370 1054 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 TXKP42681 527 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 PPARDQ03181 441 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 EDRF1Q3B7T1 1238 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 HYIQ5T013 277 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 C12orf60Q5U649 245 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ZDHHC24Q6UX98 284 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 FBXO33Q7Z6M2 555 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ARMC2Q8NEN0 867 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ZNF483Q8TF39 744 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 FAM84BQ96KN1 310 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ANKRD27Q96NW4 1050 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 TRIM51Q9BSJ1 452 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 RAB34Q9BZG1 259 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 DPH5Q9H2P9 285 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 HOMER3Q9NSC5 361 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ABCF3Q9NUQ8 709 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 PANK4Q9NVE7 773 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 EDIL3O43854 480 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 GFPT2O94808 682 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 CLTAP09496 248 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 PMS2P54278 862 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms