RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 DIS3LQ8TF46 1054 aaKnown RBP18.84■□□□□ 0.61
SMAD4-201ENST00000342988 DDI1Q8WTU0 396 aa18.84■□□□□ 0.61
SMAD4-201ENST00000342988 ATP8A2Q9NTI2 1148 aa18.84■□□□□ 0.61
SMAD4-201ENST00000342988 ERAP1Q9NZ08 941 aa18.84■□□□□ 0.61
SMAD4-201ENST00000342988 MRPL11Q9Y3B7 192 aaKnown RBP18.84■□□□□ 0.61
SMAD4-201ENST00000342988 SUPT3HO75486 399 aa18.84■□□□□ 0.61
SMAD4-201ENST00000342988 VPS50Q96JG6 964 aa18.84■□□□□ 0.61
SMAD4-201ENST00000342988 CALN1Q9BXU9 219 aa18.84■□□□□ 0.61
SMAD4-201ENST00000342988 SUPT3HB4E1H0 165 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 APOA4P06727 396 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 TRAPPC10P48553 1259 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 SURF1Q15526 300 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 MFN1Q8IWA4 741 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 CPXCR1Q8N123 301 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 CYP26B1Q9NR63 512 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 ZC3H7BQ9UGR2 993 aaKnown RBP18.83■□□□□ 0.61
SMAD4-201ENST00000342988 EPN1Q9Y6I3 576 aaPredicted RBP18.83■□□□□ 0.61
SMAD4-201ENST00000342988 MBD4O95243 580 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 TDRD7Q8NHU6 1098 aaKnown RBP18.83■□□□□ 0.61
SMAD4-201ENST00000342988 MYO9BQ13459 2157 aa18.83■□□□□ 0.61
SMAD4-201ENST00000342988 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
SMAD4-201ENST00000342988 KRT17Q04695 432 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 DMTNQ08495 405 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 NUDT18Q6ZVK8 323 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 TERB1Q8NA31 727 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 XKR9Q5GH70 373 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 CFAP73A6NFT4 308 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 KRT1P04264 644 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 IRX1P78414 480 aaPredicted RBP18.83■□□□□ 0.6
SMAD4-201ENST00000342988 NEK9Q8TD19 979 aa18.83■□□□□ 0.6
SMAD4-201ENST00000342988 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 NEMP1O14524 444 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 KRT6AP02538 564 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 KRT6BP04259 564 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 KRT6CP48668 564 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 MKRN3Q13064 507 aaKnown RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 BCL2L12Q9HB09 334 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 EPB41L5Q9HCM4 733 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 V9GY48 417 aaPredicted RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 GUCA1AP43080 201 aaPredicted RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 ZNF653Q96CK0 615 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 TEKT3Q9BXF9 490 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 LAD1O00515 517 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 ELF1P32519 619 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 ZNF713Q8N859 430 aaPredicted RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 EXT2Q93063 718 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 EHD2Q9NZN4 543 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 AKT3Q9Y243 479 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 LZTS1Q9Y250 596 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 RIMBP2O15034 1052 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 ITGAXP20702 1163 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 MAGEA9P43362 315 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 NRBP2Q9NSY0 501 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 DIS3Q9Y2L1 958 aaKnown RBP18.82■□□□□ 0.6
SMAD4-201ENST00000342988 PHLPP2Q6ZVD8 1323 aa18.82■□□□□ 0.6
SMAD4-201ENST00000342988 POLR2FP61218 127 aaKnown RBP18.81■□□□□ 0.6
SMAD4-201ENST00000342988 SNX30Q5VWJ9 437 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 WDR48Q8TAF3 677 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 MYH8P13535 1937 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 STK25O00506 426 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 AASDHQ4L235 1098 aaPredicted RBP18.81■□□□□ 0.6
SMAD4-201ENST00000342988 TBC1D22AQ8WUA7 517 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 SYNGAP1Q96PV0 1343 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 M0R2C6 588 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 HIBCHQ6NVY1 386 aaPredicted RBP18.81■□□□□ 0.6
SMAD4-201ENST00000342988 PKN3Q6P5Z2 889 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 LRRC8AQ8IWT6 810 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 BBS7Q8IWZ6 715 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 NACC1Q96RE7 527 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 B4E1Z4 1266 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 NFIBO00712 420 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 HNRNPDLO14979 420 aaKnown RBP18.81■□□□□ 0.6
SMAD4-201ENST00000342988 ATP8B2P98198 1209 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 SH3KBP1Q96B97 665 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 ADAM30Q9UKF2 790 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 WDR91A4D1P6 747 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 DIAPH2O60879 1101 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 MTERF3Q96E29 417 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 ZNF408Q9H9D4 720 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 PCDHB8Q9UN66 801 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 MOCS3O95396 460 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 PHKA1P46020 1223 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 SERPINB4P48594 390 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 HPCAP84074 193 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 OTUD7BQ6GQQ9 843 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 EXD1Q8NHP7 514 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 CHMP2BQ9UQN3 213 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 SBNO1A3KN83 1393 aa18.81■□□□□ 0.6
SMAD4-201ENST00000342988 A0A0G2JND7 137 aa18.8■□□□□ 0.6
SMAD4-201ENST00000342988 GRK2P25098 689 aa18.8■□□□□ 0.6
SMAD4-201ENST00000342988 CLK1P49759 484 aaKnown RBP18.8■□□□□ 0.6
SMAD4-201ENST00000342988 ZNF445P59923 1031 aa18.8■□□□□ 0.6
SMAD4-201ENST00000342988 GAP43P17677 238 aa18.8■□□□□ 0.6
SMAD4-201ENST00000342988 HIPK4Q8NE63 616 aa18.8■□□□□ 0.6
SMAD4-201ENST00000342988 XPO4Q9C0E2 1151 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms