RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 PGRMC1O00264 195 aaKnown RBP16.17■□□□□ 0.18
UBE3B-202ENST00000342494 IKBKBO14920 756 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 TMTC3Q6ZXV5 915 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 STAG1Q8WVM7 1258 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 ABCB11O95342 1321 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 NVLO15381 856 aaKnown RBP16.17■□□□□ 0.18
UBE3B-202ENST00000342494 SPZ1Q9BXG8 430 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 PIDD1Q9HB75 910 aa16.17■□□□□ 0.18
UBE3B-202ENST00000342494 TTC4O95801 387 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 ZBED1O96006 694 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 LRRC63Q05C16 580 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 CFAP61Q8NHU2 1237 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
UBE3B-202ENST00000342494 ZNF302Q9NR11 478 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 IL9RQ01113 521 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 BZW1Q7L1Q6 419 aaKnown RBP16.16■□□□□ 0.18
UBE3B-202ENST00000342494 PCGF5Q86SE9 256 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 AIFM3Q96NN9 605 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-202ENST00000342494 SLC35F6Q8N357 371 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 CCHCR1Q8TD31 782 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 SNAP23O00161 211 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 BAG2O95816 211 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 BEST2Q8NFU1 509 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 ZNF394Q53GI3 561 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 PAGE5Q96GU1 130 aa16.16■□□□□ 0.18
UBE3B-202ENST00000342494 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 MROH7-TTC4A0A0A0MT08 1334 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 HMGB1P1B2RPK0 211 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 PLTPP55058 493 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 IL1RL1Q01638 556 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 SPOPLQ6IQ16 392 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 SERPING1P05155 500 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 PSMA2P25787 234 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 PADI6Q6TGC4 694 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 KIAA1586Q9HCI6 787 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 GDAQ9Y2T3 454 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 SCINQ9Y6U3 715 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 C10orf76Q5T2E6 689 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 TRIM42Q8IWZ5 723 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 NDST4Q9H3R1 872 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 ZWILCHQ9H900 591 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 OLA1Q9NTK5 396 aaKnown RBP16.15■□□□□ 0.18
UBE3B-202ENST00000342494 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 HSPA6P17066 643 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 APBA1Q02410 837 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 RAET1EQ8TD07 263 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 HSPH1Q92598 858 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 MTRQ99707 1265 aa16.15■□□□□ 0.18
UBE3B-202ENST00000342494 RHPN2Q8IUC4 686 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 ALKBH8Q96BT7 664 aaKnown RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 RCOR1Q9UKL0 485 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 TNPO2O14787 897 aaKnown RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 FTCDO95954 541 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 EIF4A3P38919 411 aaKnown RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 GPT2Q8TD30 523 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 NEMP1O14524 444 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 CYP19A1P11511 503 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 ZBED6P86452 979 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 ZNF699Q32M78 642 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 SLC44A5Q8NCS7 719 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 CEP95Q96GE4 821 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 COPB2P35606 906 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 COG7P83436 770 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 PPP6R3Q5H9R7 873 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 CDC26Q8NHZ8 85 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 SPATA33Q96N06 139 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 CPVLQ9H3G5 476 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 CDK12Q9NYV4 1490 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-202ENST00000342494 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 TMCO4Q5TGY1 634 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 FGD4Q96M96 766 aa16.14■□□□□ 0.17
UBE3B-202ENST00000342494 SFNP31947 248 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 NNMTP40261 264 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 STAT3P40763 770 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 LRRC31Q6UY01 552 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 CDC23Q9UJX2 597 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 ADCY1Q08828 1119 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms