RNA–Protein interactions for RNA: ENST00000342222.6

IKBKB-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-201ENST00000342222 USP38Q8NB14 1042 aa13.21□□□□□ -0.3
IKBKB-201ENST00000342222 MAGOHBQ96A72 148 aaKnown RBP13.21□□□□□ -0.3
IKBKB-201ENST00000342222 NAP1L3Q99457 506 aaPredicted RBP13.21□□□□□ -0.3
IKBKB-201ENST00000342222 PAIP2Q9BPZ3 127 aaKnown RBP13.21□□□□□ -0.3
IKBKB-201ENST00000342222 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.3
IKBKB-201ENST00000342222 RAB17Q9H0T7 212 aa13.21□□□□□ -0.3
IKBKB-201ENST00000342222 TMOD2Q9NZR1 351 aa13.21□□□□□ -0.3
IKBKB-201ENST00000342222 ARHGEF35A5YM69 484 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 PRLRP16471 622 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 TTMPQ5BVD1 217 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 ODR4Q5SWX8 454 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 LRRC55Q6ZSA7 311 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 CCT8L2Q96SF2 557 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 RGL1Q9NZL6 768 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 THRAP3Q9Y2W1 955 aaKnown RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 RASSF10A6NK89 507 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 RGS16O15492 202 aaPredicted RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 TTI1O43156 1089 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 MYBP10242 640 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 COPB2P35606 906 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 PPP4CP60510 307 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 GKAP1Q5VSY0 366 aaPredicted RBP13.2□□□□□ -0.3
IKBKB-201ENST00000342222 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 HOOK3Q86VS8 718 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 BAP1Q92560 729 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 FMO2Q99518 471 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 SAMD15Q9P1V8 674 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 DAAM1Q9Y4D1 1078 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 TJP1Q07157 1748 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 MYO1FO00160 1098 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 GAS7O60861 476 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 TRIM49P0CI25 452 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 TRIM49CP0CI26 452 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 VPS41P49754 854 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 CALCOCO2Q13137 446 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 MESDQ14696 234 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 PCIF1Q9H4Z3 704 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
IKBKB-201ENST00000342222 FERP16591 822 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
IKBKB-201ENST00000342222 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 ORC2Q13416 577 aaPredicted RBP13.19□□□□□ -0.3
IKBKB-201ENST00000342222 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 TRIM51Q9BSJ1 452 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 FGFBP2Q9BYJ0 223 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 NF2P35240 595 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 CUL1Q13616 776 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 ZNF473Q8WTR7 871 aaKnown RBP13.19□□□□□ -0.3
IKBKB-201ENST00000342222 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 BAIAP2L1Q9UHR4 511 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 GPR75-ASB3A0A0A6YYF3 556 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 RSPH10B2B2RC85 870 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 RSPH10BP0C881 870 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 CYP11B2P19099 503 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 MDH1P40925 334 aaKnown RBP13.19□□□□□ -0.3
IKBKB-201ENST00000342222 NT5C2P49902 561 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
IKBKB-201ENST00000342222 TNIP1Q15025 636 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 UBL4BQ8N7F7 174 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
IKBKB-201ENST00000342222 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.31e-7■■■□□ 15.9
IKBKB-201ENST00000342222 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 MAP2K2P36507 400 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 MED24O75448 989 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 PSMC2P35998 433 aaKnown RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 CASP4P49662 377 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 E2F5Q15329 346 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 SPATS2Q86XZ4 545 aaKnown RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 EPN3Q9H201 632 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 DNAJC12Q9UKB3 198 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 ECM1Q16610 540 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 ZNF571Q7Z3V5 609 aaPredicted RBP13.18□□□□□ -0.3
IKBKB-201ENST00000342222 METTL13Q8N6R0 699 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 ANKRD42Q8N9B4 389 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
IKBKB-201ENST00000342222 NAGPAQ9UK23 515 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms