RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 TBC1D16Q8TBP0 767 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 HDAC6Q9UBN7 1215 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 MAP2P11137 1827 aaKnown RBP20.93■□□□□ 0.94
CDK13-202ENST00000340829 SP8Q8IXZ3 490 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 DAGLAQ9Y4D2 1042 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 NNTQ13423 1086 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 SBK1Q52WX2 424 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 ANKRD40Q6AI12 368 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 PADI6Q6TGC4 694 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 SMC1BQ8NDV3 1235 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 RMDN3Q96TC7 470 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 RIOK1Q9BRS2 568 aaKnown RBP20.93■□□□□ 0.94
CDK13-202ENST00000340829 MIS12Q9H081 205 aa20.93■□□□□ 0.94
CDK13-202ENST00000340829 INTS9Q9NV88 658 aaKnown RBP20.93■□□□□ 0.94
CDK13-202ENST00000340829 FLT1P17948 1338 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 TROVE2P10155 538 aaKnown RBP eCLIP20.92■□□□□ 0.94
CDK13-202ENST00000340829 ALCAMQ13740 583 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 RILPQ96NA2 401 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 WDR24Q96S15 920 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 KNOP1Q1ED39 458 aaKnown RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 DALRD3Q5D0E6 543 aaKnown RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 FGGP02679 453 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 PCK1P35558 622 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 TRIP13Q15645 432 aaPredicted RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 CYP4F22Q6NT55 531 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 CC2D1AQ6P1N0 951 aaPredicted RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 RFX6Q8HWS3 928 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 TUBE1Q9UJT0 475 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 SLCO1A2P46721 670 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 GCLMP48507 274 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 E4F1Q66K89 784 aaPredicted RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 CCDC117Q8IWD4 279 aaPredicted RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 IRX2Q9BZI1 471 aaPredicted RBP20.92■□□□□ 0.94
CDK13-202ENST00000340829 TRIM9Q9C026 710 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 SEPT10Q9P0V9 454 aa20.92■□□□□ 0.94
CDK13-202ENST00000340829 MXD3Q9BW11 206 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 NACA2Q9H009 215 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 PRR5LQ6MZQ0 368 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 DPP9Q86TI2 863 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 ATP2A3Q93084 1043 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 TBC1D31Q96DN5 1066 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 PPP1R16BQ96T49 567 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 MTMR4Q9NYA4 1195 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 ODF2LQ9ULJ1 636 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 SARNPP82979 210 aaKnown RBP20.91■□□□□ 0.94
CDK13-202ENST00000340829 DPYDQ12882 1025 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 SDCCAG8Q86SQ7 713 aaPredicted RBP20.91■□□□□ 0.94
CDK13-202ENST00000340829 KCNB2Q92953 911 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 GJD4Q96KN9 370 aaPredicted RBP20.91■□□□□ 0.94
CDK13-202ENST00000340829 JPH2Q9BR39 696 aaPredicted RBP20.91■□□□□ 0.94
CDK13-202ENST00000340829 ANAPC4Q9UJX5 808 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 K7ERI5 159 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 NCK2O43639 380 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 KRT1P04264 644 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 DYNLT1P63172 113 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 DR1Q01658 176 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 HAUS1Q96CS2 278 aa20.91■□□□□ 0.94
CDK13-202ENST00000340829 SPATA31A1Q5TZJ5 1347 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 SRGAP2CP0DJJ0 459 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 YWHAGP61981 247 aaKnown RBP eCLIP20.9■□□□□ 0.94
CDK13-202ENST00000340829 GRIN1Q05586 938 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 PPP2R5CQ13362 524 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 KCNB1Q14721 858 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 DNAJC24Q6P3W2 148 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 PPLO60437 1756 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 CRCPO75575 148 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 LMNB2Q03252 620 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 MAD1L1Q9Y6D9 718 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 ZNF233A6NK53 670 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 UBE2Q2LH0YL09 131 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 MARK3P27448 753 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 IFRD2Q12894 506 aaPredicted RBP20.9■□□□□ 0.94
CDK13-202ENST00000340829 NFRKBQ6P4R8 1299 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 GSPT2Q8IYD1 628 aaKnown RBP20.9■□□□□ 0.94
CDK13-202ENST00000340829 EXOC4Q96A65 974 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 FAM81BQ96LP2 452 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 CCSER1Q9C0I3 900 aa20.9■□□□□ 0.94
CDK13-202ENST00000340829 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.9■□□□□ 0.94
CDK13-202ENST00000340829 SCARA5Q6ZMJ2 495 aa20.89■□□□□ 0.94
CDK13-202ENST00000340829 MRPL47Q9HD33 250 aaKnown RBP20.89■□□□□ 0.94
CDK13-202ENST00000340829 A0A1B0GTH6 734 aa20.89■□□□□ 0.94
CDK13-202ENST00000340829 ANO9A1A5B4 782 aa20.89■□□□□ 0.94
CDK13-202ENST00000340829 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.94
CDK13-202ENST00000340829 NME8Q8N427 588 aa20.89■□□□□ 0.94
CDK13-202ENST00000340829 WHAMMQ8TF30 809 aa20.89■□□□□ 0.94
CDK13-202ENST00000340829 TLR3O15455 904 aaKnown RBP20.89■□□□□ 0.93
CDK13-202ENST00000340829 HSPA6P17066 643 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 IFT88Q13099 833 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 MSTO1Q9BUK6 570 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 ANAPC5Q9UJX4 755 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 FEM1BQ9UK73 627 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 A0A1W2PQC6 194 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 GPR162Q16538 588 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 SPATS2Q86XZ4 545 aaKnown RBP20.89■□□□□ 0.93
CDK13-202ENST00000340829 MAP7D3Q8IWC1 876 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 XXYLT1Q8NBI6 393 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 ENGASEQ8NFI3 743 aa20.89■□□□□ 0.93
CDK13-202ENST00000340829 FMO2Q99518 471 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms