RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 LOXHD1Q8IVV2 1947 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 WDR64B1ANS9 1081 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 CHRNA1P02708 482 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 ATP4AP20648 1035 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 GRIN2CQ14957 1233 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 LETM2Q2VYF4 491 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 PLEKHG4Q58EX7 1191 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 NEK8Q86SG6 692 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 RSPH3Q86UC2 560 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 HERC6Q8IVU3 1022 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 DBF4BQ8NFT6 615 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 DNAJB3Q8WWF6 145 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 TEKT3Q9BXF9 490 aa16.52■□□□□ 0.24
ERCC1-203ENST00000340192 DDX25Q9UHL0 483 aaKnown RBP16.52■□□□□ 0.24
ERCC1-203ENST00000340192 MAFBQ9Y5Q3 323 aaPredicted RBP16.52■□□□□ 0.24
ERCC1-203ENST00000340192 CHMP2AO43633 222 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 SLC37A4O43826 429 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 HBP1O60381 514 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 EFCAB14O75071 495 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 PSMD10O75832 226 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 KRT2P35908 639 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 FOSBP53539 338 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 DEFB103AP81534 67 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 NR5A1Q13285 461 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
ERCC1-203ENST00000340192 CKAP2LQ8IYA6 745 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
ERCC1-203ENST00000340192 UNC45AQ9H3U1 944 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 SLC28A3Q9HAS3 691 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 GABBR1Q9UBS5 961 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 PCDHA2Q9Y5H9 948 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 EVPLQ92817 2033 aa16.51■□□□□ 0.23
ERCC1-203ENST00000340192 IGSF9BQ9UPX0 1349 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 ZBTB42B2RXF5 422 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
ERCC1-203ENST00000340192 MMP1P03956 469 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 SFNP31947 248 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 JAK3P52333 1124 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 MGAT3Q09327 533 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 TRIM29Q14134 588 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 MTHFD1LQ6UB35 978 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
ERCC1-203ENST00000340192 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-203ENST00000340192 SEPT8Q92599 483 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 ZSCAN31Q96LW9 406 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-203ENST00000340192 UPF2Q9HAU5 1272 aaKnown RBP16.5■□□□□ 0.23
ERCC1-203ENST00000340192 TRANK1O15050 2925 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 PRUNE2Q8WUY3 3088 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 COL1A2P08123 1366 aa16.5■□□□□ 0.23
ERCC1-203ENST00000340192 UNC80Q8N2C7 3258 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 RPLP2P05387 115 aaKnown RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 CA3P07451 260 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 GCFC2P16383 781 aaKnown RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 KLRC1P26715 233 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 RABEP1Q15276 862 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 ZNF484Q5JVG2 852 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 PPP2R2DQ66LE6 453 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 KRT40Q6A162 431 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 SH2B1Q9NRF2 756 aaPredicted RBP16.49■□□□□ 0.23
ERCC1-203ENST00000340192 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
ERCC1-203ENST00000340192 SMIM35A0A1B0GVV1 85 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 BTBD18B2RXH4 712 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 KIF28PB7ZC32 967 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 TLL1O43897 1013 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 GHRP10912 638 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 TMEM62Q0P6H9 643 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 LPIN1Q14693 890 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 UGCGQ16739 394 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 FBXO47Q5MNV8 452 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 IER5Q5VY09 327 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 B3GNT9Q6UX72 402 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
ERCC1-203ENST00000340192 MIER3Q7Z3K6 550 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
ERCC1-203ENST00000340192 APBB2Q92870 758 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 NAP1L4Q99733 375 aaKnown RBP16.48■□□□□ 0.23
ERCC1-203ENST00000340192 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 PRDM12Q9H4Q4 367 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 REV3LO60673 3130 aa16.48■□□□□ 0.23
ERCC1-203ENST00000340192 M0QZ92 97 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 ZNF862O60290 1169 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 AMHP03971 560 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 FOSL2P15408 326 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 PRKCEQ02156 737 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 RDM1Q8NG50 284 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 FAM167AQ96KS9 214 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms