RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 UBAP2Q5T6F2 1119 aaKnown RBP17.61■□□□□ 0.41
SCARB1-202ENST00000339570 TRIM59Q8IWR1 403 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 PGRMC1O00264 195 aaKnown RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 ZBTB39O15060 712 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 EPB41P11171 864 aaKnown RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 XRCC5P13010 732 aaKnown RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 GLE1Q53GS7 698 aaKnown RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 WHAMMQ8TF30 809 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 DDX20Q9UHI6 824 aaKnown RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 NAGPAQ9UK23 515 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 SNX24Q9Y343 169 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 UTRNP46939 3433 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 FXR2P51116 673 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 GPSM2P81274 684 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 EP400Q96L91 3159 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 TMBIM4Q9HC24 238 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 RGL1Q9NZL6 768 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 CPP00450 1065 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 CYP2J2P51589 502 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 C16orf86Q6ZW13 317 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 CCDC91Q7Z6B0 441 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 CUL5Q93034 780 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 MYCBPQ99417 103 aaPredicted RBP17.6■□□□□ 0.41
SCARB1-202ENST00000339570 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
SCARB1-202ENST00000339570 GMNCA6NCL1 334 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 AKAP3O75969 853 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 CYP11B2P19099 503 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 ZC2HC1CQ53FD0 456 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-202ENST00000339570 BHMT2Q9H2M3 363 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 KLC4Q9NSK0 619 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 LRP5O75197 1615 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 HMGB1P1B2RPK0 211 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-202ENST00000339570 SHBGP04278 402 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 TRIM49P0CI25 452 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 TRIM49CP0CI26 452 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 ITIH3Q06033 890 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 ZNF746Q6NUN9 644 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-202ENST00000339570 CLEC4GQ6UXB4 293 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 CYP2W1Q8TAV3 490 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 RAPGEF5Q92565 580 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 SLC40A1Q9NP59 571 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 PKD2L1Q9P0L9 805 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 FOXO6A8MYZ6 492 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 H2AFZP0C0S5 128 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 PDE6BP35913 854 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 H2AFVQ71UI9 128 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 OTUD6AQ7L8S5 288 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
SCARB1-202ENST00000339570 NCAPGQ9BPX3 1015 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 CD209Q9NNX6 404 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 MTMR4Q9NYA4 1195 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 PCDHA1Q9Y5I3 950 aa17.59■□□□□ 0.41
SCARB1-202ENST00000339570 DNM1LO00429 736 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 CTNND1O60716 968 aaKnown RBP17.58■□□□□ 0.41
SCARB1-202ENST00000339570 FAM107AO95990 144 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 COG2Q14746 738 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 FAM212AQ96EL1 285 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 SH2D3AQ9BRG2 576 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 REEP2Q9BRK0 252 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 GANQ9H2C0 597 aa17.58■□□□□ 0.41
SCARB1-202ENST00000339570 CAND2O75155 1236 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 AFPP02771 609 aaKnown RBP17.58■□□□□ 0.4
SCARB1-202ENST00000339570 PON1P27169 355 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 FAM133BQ5BKY9 247 aaKnown RBP17.58■□□□□ 0.4
SCARB1-202ENST00000339570 ARSHQ5FYA8 562 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 ZNF572Q7Z3I7 529 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-202ENST00000339570 IRF2BP2Q7Z5L9 587 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 ISCUQ9H1K1 167 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 BAIAP2L1Q9UHR4 511 aa17.58■□□□□ 0.4
SCARB1-202ENST00000339570 FNTAP49354 379 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 GALCP54803 685 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 GIMAP7Q8NHV1 300 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 TPCN2Q8NHX9 752 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 EIF4E1BA6NMX2 242 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 ECHS1P30084 290 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 NMT1P30419 496 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 ZNF76P36508 570 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 USP11P51784 963 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 MRPL12P52815 198 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 LRRC14Q15048 493 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 DOK7Q18PE1 504 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 TMEM119Q4V9L6 283 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 PNMA8AQ86V59 439 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 CNPY4Q8N129 248 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 PRPF38AQ8NAV1 312 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 PPP1R9AQ9ULJ8 1098 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 UTP11Q9Y3A2 253 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 VIMP08670 466 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 POLD1P28340 1107 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 CTTNQ14247 550 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 SPICE1Q8N0Z3 855 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 LRRC45Q96CN5 670 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 SEC16BQ96JE7 1060 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms