RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 RAB3IPQ96QF0 476 aaPredicted RBP13.51□□□□□ -0.25
RIOK3-201ENST00000339486 XPO6Q96QU8 1125 aaKnown RBP13.51□□□□□ -0.25
RIOK3-201ENST00000339486 SPATS2LQ9NUQ6 558 aaKnown RBP13.51□□□□□ -0.25
RIOK3-201ENST00000339486 SPATA31A3Q5VYP0 1347 aa13.51□□□□□ -0.25
RIOK3-201ENST00000339486 DDX39AO00148 427 aaKnown RBP13.51□□□□□ -0.25
RIOK3-201ENST00000339486 CHN1P15882 459 aa13.51□□□□□ -0.25
RIOK3-201ENST00000339486 FGFR2P21802 821 aa13.51□□□□□ -0.25
RIOK3-201ENST00000339486 TRIP13Q15645 432 aaPredicted RBP13.51□□□□□ -0.25
RIOK3-201ENST00000339486 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.51□□□□□ -0.25
RIOK3-201ENST00000339486 P3H4Q92791 437 aa13.51□□□□□ -0.25
RIOK3-201ENST00000339486 STXBP3O00186 592 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 SLC9A1P19634 815 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 PTK2Q05397 1052 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 MUM1Q2TAK8 710 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 RAPGEF5Q92565 580 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 PDE6BP35913 854 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 ITIH3Q06033 890 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 SLMAPQ14BN4 828 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 CENPPQ6IPU0 288 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 CYP4F22Q6NT55 531 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 SFR1Q86XK3 245 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 VPS52Q8N1B4 723 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 MTRQ99707 1265 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 FAM167BQ9BTA0 163 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 VPS37BQ9H9H4 285 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 TMBIM4Q9HC24 238 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 AGPSO00116 658 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 CFBP00751 764 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 GCFC2P16383 781 aaKnown RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 ASPRV1Q53RT3 343 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
RIOK3-201ENST00000339486 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF233A6NK53 670 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 EPHB6O15197 1021 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 PDHBP11177 359 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 BYSLQ13895 437 aaKnown RBP13.49□□□□□ -0.25
RIOK3-201ENST00000339486 FAM47EQ6ZV65 393 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 USP37Q86T82 979 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 METTL13Q8N6R0 699 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 KIFAP3Q92845 792 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 RIOK1Q9BRS2 568 aaKnown RBP13.49□□□□□ -0.25
RIOK3-201ENST00000339486 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 TMOD4Q9NZQ9 345 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 DNAJC12Q9UKB3 198 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 RASSF2P50749 326 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 USP11P51784 963 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 TCP10Q12799 353 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 IL17AQ16552 155 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 PPP1R14CQ8TAE6 165 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 GGA1Q9UJY5 639 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 POC1B-GALNT4F8VUJ3 575 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 ECEL1O95672 775 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 UCHL3P15374 230 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 COPB2P35606 906 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 MYL7Q01449 175 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
RIOK3-201ENST00000339486 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
RIOK3-201ENST00000339486 PRMT1Q99873 361 aaKnown RBP13.49□□□□□ -0.25
RIOK3-201ENST00000339486 FAM208AQ9UK61 1670 aaKnown RBP13.49□□□□□ -0.25
RIOK3-201ENST00000339486 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 IFNB1P01574 187 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 ATF2P15336 505 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 GTF2IP78347 998 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 SGO2Q562F6 1265 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 AGBL2Q5U5Z8 902 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 AP1ARQ63HQ0 302 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 POTEEQ6S8J3 1075 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF34Q8IZ26 560 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 CNPY4Q8N129 248 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 CCT8L1PA6NM43 557 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 NR3C1P04150 777 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms