RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 EHMT1Q9H9B1 1298 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 CYP39A1Q9NYL5 469 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 COL4A3BPQ9Y5P4 624 aa8.18□□□□□ -1.1
SRFBP1-201ENST00000339397 A0A1W2PQC6 194 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 AKAP3O75969 853 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 TERF1P54274 439 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 GADL1Q6ZQY3 521 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 KIF18AQ8NI77 898 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF215Q9UL58 517 aaPredicted RBP8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 RCCD1A6NED2 376 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 HIP1RO75146 1068 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 FAM13AO94988 1023 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 BCRP11274 1271 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 GNG11P61952 73 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 MAPK7Q13164 816 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 TTLL12Q14166 644 aaPredicted RBP8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 MAN2A1Q16706 1144 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 PADI6Q6TGC4 694 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 FAM114A1Q8IWE2 563 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 ZSWIM2Q8NEG5 633 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF526Q8TF50 670 aaPredicted RBP8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 ERGIC2Q96RQ1 377 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 DNAJC7Q99615 494 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 TSG101Q99816 390 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 PAGR1Q9BTK6 254 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 TEX13BQ9BXU2 312 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 NLRC4Q9NPP4 1024 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 PARP14Q460N5 1801 aa8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 DICER1Q9UPY3 1922 aaKnown RBP8.17□□□□□ -1.1
SRFBP1-201ENST00000339397 RBBP6Q7Z6E9 1792 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 USO1O60763 962 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 TBCAO75347 108 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 NOL4O94818 638 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 P4HBP07237 508 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ACTN1P12814 892 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 FECHP22830 423 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 PPP1R2P41236 205 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 Q3C1V9 767 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ODR4Q5SWX8 454 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 EEPD1Q7L9B9 569 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF720Q7Z2F6 126 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 PARVGQ9HBI0 331 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 TXNRD2Q9NNW7 524 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 HOXC10Q9NYD6 342 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 PAXBP1Q9Y5B6 917 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 PCDHB13Q9Y5F0 798 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 BACH1O14867 736 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF862O60290 1169 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 TPM2P07951 284 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 TPM1P09493 284 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 CCDC175P0C221 793 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 YWHABP31946 246 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 EPHX2P34913 555 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 RARRES1P49788 294 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 CYP26C1Q6V0L0 522 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 TRIM59Q8IWR1 403 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 CDCA5Q96FF9 252 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 KIFC3Q9BVG8 833 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 CSADQ9Y600 493 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 EPN1Q9Y6I3 576 aaPredicted RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 FRMPD4Q14CM0 1322 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ZMYM2Q9UBW7 1377 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 DOCK5Q9H7D0 1870 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 FAM170AA1A519 330 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ARHGEF35A5YM69 484 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF263O14978 683 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ZSCAN12O43309 604 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ECM2O94769 699 aaPredicted RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 NDUFA10O95299 355 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ARHGAP25P42331 645 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 QARSP47897 775 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 KCNH2Q12809 1159 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 MKRN3Q13064 507 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ENOX2Q16206 610 aaKnown RBP8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 FKBP15Q5T1M5 1219 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ANO5Q75V66 913 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 RRAGAQ7L523 313 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 TMTC1Q8IUR5 882 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 FAM178BQ8IXR5 827 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ZSWIM4Q9H7M6 989 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 ACAD9Q9H845 621 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 PPP2R3BQ9Y5P8 575 aa8.16□□□□□ -1.1
SRFBP1-201ENST00000339397 LRRC53A6NM62 1247 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 LRRN2O75325 713 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 URI1O94763 535 aaPredicted RBP8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 NR3C1P04150 777 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 PGK2P07205 417 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 KCNA2P16389 499 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 SLC9A1P19634 815 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 GJA5P36382 358 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 TMEM63BQ5T3F8 832 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms