RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TRIM9Q9C026 710 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 BHMT2Q9H2M3 363 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 TUBE1Q9UJT0 475 aa16.21■□□□□ 0.18
NIPAL3-202ENST00000339255 KAT6AQ92794 2004 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 FOXN1O15353 648 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 PPFIA4O75335 1185 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 CCDC192P0DO97 292 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 ELNP15502 786 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 STAT5BP51692 787 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 PSMC6P62333 389 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 PRKCEQ02156 737 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 UGCGQ16739 394 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 BRDTQ58F21 947 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 XKR3Q5GH77 459 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 GRAMD1CQ8IYS0 662 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 TRIML1Q8N9V2 468 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 GTPBP4Q9BZE4 634 aaKnown RBP16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 AP5M1Q9H0R1 490 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 RMND1Q9NWS8 449 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 TSKSQ9UJT2 592 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 TRIM17Q9Y577 477 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 PCDHA5Q9Y5H7 936 aa16.2■□□□□ 0.18
NIPAL3-202ENST00000339255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 ARHGEF35A5YM69 484 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 SEPT4O43236 478 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 CPT1AP50416 773 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 CACNB2Q08289 660 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 DGKDQ16760 1214 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 GJC2Q5T442 439 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 AFG1LQ8WV93 481 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 GLG1Q92896 1179 aa16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 CCDC47Q96A33 483 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-202ENST00000339255 A6NJR5 290 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 ADCY6O43306 1168 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 ZNF862O60290 1169 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 OATP04181 439 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 DHX8Q14562 1220 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 TMEM63BQ5T3F8 832 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 GPBP1Q86WP2 473 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 TRPV1Q8NER1 839 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 STAMQ92783 540 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 ZNF215Q9UL58 517 aaPredicted RBP16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 TELO2Q9Y4R8 837 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 PPME1Q9Y570 386 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 PVALEFA0A1B0GWK0 134 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 MYMKA6NI61 221 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 MMP3P08254 477 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 CYP11B2P19099 503 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 GRK4P32298 578 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 RARRES1P49788 294 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 ASIC1P78348 528 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 CUL4BQ13620 913 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 STX1AQ16623 288 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 DDX12PQ92771 950 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 PCYT2Q99447 389 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 TIPINQ9BVW5 301 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
NIPAL3-202ENST00000339255 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 CAVIN2O95810 425 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 RPN1P04843 607 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 LGALS2P05162 132 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 KRT18P05783 430 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 RARBP10826 455 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 KCNB1Q14721 858 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 ANO5Q75V66 913 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 BLZF1Q9H2G9 400 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 SPC25Q9HBM1 224 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
NIPAL3-202ENST00000339255 MSCO60682 206 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 KPNA6O60684 536 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 GUCY2CP25092 1073 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 CNGA1P29973 690 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 TYRO3Q06418 890 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 XKR9Q5GH70 373 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 RINT1Q6NUQ1 792 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 PADI6Q6TGC4 694 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 UNC13DQ70J99 1090 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 ERCC4Q92889 916 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 FUCA2Q9BTY2 467 aa16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 NIFKQ9BYG3 293 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 SEPT9Q9UHD8 586 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-202ENST00000339255 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms