RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ECM1Q16610 540 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 TRIM68Q6AZZ1 485 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 AADACL2Q6P093 401 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 ZMYND12Q9H0C1 365 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 BCAS3Q9H6U6 928 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
PCDH8-201ENST00000338862 TLR2O60603 784 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 KCNJ1P48048 391 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 QPCTQ16769 361 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 HP1BP3Q5SSJ5 553 aaPredicted RBP15.39■□□□□ 0.05
PCDH8-201ENST00000338862 ZNF571Q7Z3V5 609 aaPredicted RBP15.39■□□□□ 0.05
PCDH8-201ENST00000338862 RNF10Q8N5U6 811 aaKnown RBP15.39■□□□□ 0.05
PCDH8-201ENST00000338862 BANK1Q8NDB2 785 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
PCDH8-201ENST00000338862 MYBP10242 640 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 CCDC50Q8IVM0 306 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 MICAL1Q8TDZ2 1067 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 BAP1Q92560 729 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 SEC16BQ96JE7 1060 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 LZTS2Q9BRK4 669 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 MAGEF1Q9HAY2 307 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 GRIN2DO15399 1336 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 LMO7Q8WWI1 1683 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 UCHL3P15374 230 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 HS2ST1Q7LGA3 356 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 KIF2BQ8N4N8 673 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 CCDC63Q8NA47 563 aa15.39■□□□□ 0.05
PCDH8-201ENST00000338862 NUCKS1Q9H1E3 243 aaKnown RBP15.39■□□□□ 0.05
PCDH8-201ENST00000338862 PVALEFA0A1B0GWK0 134 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 CHUKO15111 745 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 PLCG2P16885 1265 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 KCNA1Q09470 495 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 GLE1Q53GS7 698 aaKnown RBP15.38■□□□□ 0.05
PCDH8-201ENST00000338862 CCDC197Q8NCU1 140 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 KCNV2Q8TDN2 545 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 RAPGEF5Q92565 580 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 SCP2P22307 547 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 PSMC6P62333 389 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 DR1Q01658 176 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 SP4Q02446 784 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 ZC2HC1CQ53FD0 456 aaPredicted RBP15.38■□□□□ 0.05
PCDH8-201ENST00000338862 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 ADGRF4Q8IZF3 695 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 FAM118BQ9BPY3 351 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 A0A1W2PRG0 241 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 ATMINO43313 823 aaPredicted RBP15.38■□□□□ 0.05
PCDH8-201ENST00000338862 FAM107AO95990 144 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 RPL13P26373 211 aaKnown RBP15.38■□□□□ 0.05
PCDH8-201ENST00000338862 CNBD1Q8NA66 436 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 VEZTQ9HBM0 779 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 USP40Q9NVE5 1235 aa15.38■□□□□ 0.05
PCDH8-201ENST00000338862 DDX20Q9UHI6 824 aaKnown RBP15.38■□□□□ 0.05
PCDH8-201ENST00000338862 A0A1W2PQJ5 194 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 A6NNZ2 444 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 CAND2O75155 1236 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 CASP5P51878 434 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 GALCP54803 685 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 TUBB8Q3ZCM7 444 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 PSMD1Q99460 953 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 NEUROG2Q9H2A3 272 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
PCDH8-201ENST00000338862 GDF11O95390 407 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 FECHP22830 423 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 NMT1P30419 496 aaKnown RBP15.37■□□□□ 0.05
PCDH8-201ENST00000338862 PRPHP41219 470 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 CALCOCO2Q13137 446 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 PPP2R5AQ15172 486 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 KDM7AQ6ZMT4 941 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 PARP9Q8IXQ6 854 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 PRMT1Q99873 361 aaKnown RBP15.37■□□□□ 0.05
PCDH8-201ENST00000338862 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 MTRF1LQ9UGC7 380 aaKnown RBP15.37■□□□□ 0.05
PCDH8-201ENST00000338862 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 CALUO43852 315 aaPredicted RBP15.37■□□□□ 0.05
PCDH8-201ENST00000338862 CHN1P15882 459 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 ERFP50548 548 aa15.37■□□□□ 0.05
PCDH8-201ENST00000338862 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCDH8-201ENST00000338862 SSU72P8A0A1W2PR75 194 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 ATRNO75882 1429 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 NEDD9Q14511 834 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 NYXQ9GZU5 481 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 MYH13Q9UKX3 1938 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 FLT1P17948 1338 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 EEF2P13639 858 aaKnown RBP15.36■□□□□ 0.05
PCDH8-201ENST00000338862 MTMR3Q13615 1198 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 FAM47EQ6ZV65 393 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 HOOK3Q86VS8 718 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 IQCKQ8N0W5 287 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 HOOK2Q96ED9 719 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 SH3GL2Q99962 352 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 RNF14Q9UBS8 474 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 NAGPAQ9UK23 515 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 FRMD4BQ9Y2L6 1034 aa15.36■□□□□ 0.05
PCDH8-201ENST00000338862 FOXO6A8MYZ6 492 aa15.35■□□□□ 0.05
PCDH8-201ENST00000338862 ZNF844Q08AG5 666 aa15.35■□□□□ 0.05
PCDH8-201ENST00000338862 MTM1Q13496 603 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms